Gene : UBQ4 C. reinhardtii v5.6
Primary Identifier:  ? Cre08.g382650 Defline:  (1 of 2) K09313 - homeobox protein cut-like (CUTL)
Genomic Order:  650 Name:  ? Cre08.g382650
Secondary Identifier:  ? PAC:30774088
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre08.g382650 0.5kb upstream 0.5kb upstream 9602 true chromosome_8: 4526235-4535836 Chlamydomonas reinhardtii
Cre08.g382650 0.5kb upstream 0.5kb upstream 500 false chromosome_8: 4526235-4526734 Chlamydomonas reinhardtii
Cre08.g382650 0.5kb downstream 0.5kb downstream 9602 true chromosome_8: 4526735-4536336 Chlamydomonas reinhardtii
Cre08.g382650 0.5kb downstream 0.5kb downstream 500 false chromosome_8: 4535837-4536336 Chlamydomonas reinhardtii
Cre08.g382650 1.0kb upstream 1.0kb upstream 10102 true chromosome_8: 4525735-4535836 Chlamydomonas reinhardtii
Cre08.g382650 1.0kb upstream 1.0kb upstream 1000 false chromosome_8: 4525735-4526734 Chlamydomonas reinhardtii
Cre08.g382650 1.0kb downstream 1.0kb downstream 10102 true chromosome_8: 4526735-4536836 Chlamydomonas reinhardtii
Cre08.g382650 1.0kb downstream 1.0kb downstream 1000 false chromosome_8: 4535837-4536836 Chlamydomonas reinhardtii
Cre08.g382650 2.0kb upstream 2.0kb upstream 11102 true chromosome_8: 4524735-4535836 Chlamydomonas reinhardtii
Cre08.g382650 2.0kb upstream 2.0kb upstream 2000 false chromosome_8: 4524735-4526734 Chlamydomonas reinhardtii
Cre08.g382650 2.0kb downstream 2.0kb downstream 11102 true chromosome_8: 4526735-4537836 Chlamydomonas reinhardtii
Cre08.g382650 2.0kb downstream 2.0kb downstream 2000 false chromosome_8: 4535837-4537836 Chlamydomonas reinhardtii
Cre08.g382650 5.0kb upstream 5.0kb upstream 14102 true chromosome_8: 4521735-4535836 Chlamydomonas reinhardtii
Cre08.g382650 5.0kb upstream 5.0kb upstream 5000 false chromosome_8: 4521735-4526734 Chlamydomonas reinhardtii
Cre08.g382650 5.0kb downstream 5.0kb downstream 14102 true chromosome_8: 4526735-4540836 Chlamydomonas reinhardtii
Cre08.g382650 5.0kb downstream 5.0kb downstream 5000 false chromosome_8: 4535837-4540836 Chlamydomonas reinhardtii
Cre08.g382650 10.0kb upstream 10.0kb upstream 19102 true chromosome_8: 4516735-4535836 Chlamydomonas reinhardtii
Cre08.g382650 10.0kb upstream 10.0kb upstream 10000 false chromosome_8: 4516735-4526734 Chlamydomonas reinhardtii
Cre08.g382650 10.0kb downstream 10.0kb downstream 19102 true chromosome_8: 4526735-4545836 Chlamydomonas reinhardtii
Cre08.g382650 10.0kb downstream 10.0kb downstream 10000 false chromosome_8: 4535837-4545836 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111194 5260 Chlorophyte View MSA
123425319 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.304       Low
cufflinks 1.436        
cufflinks 1.304        
cufflinks 1.634        
cufflinks 1.023        
cufflinks 1.073        
cufflinks 2.102       High
cufflinks 1.866        
cufflinks 0.442       Low
cufflinks 0.42       Low
cufflinks 1.415        
cufflinks 2.031        
cufflinks 0.461       Low
cufflinks 1.331        
cufflinks 1.372        
cufflinks 0.672        
cufflinks 1.07        
cufflinks 1.391        
cufflinks 0.416       Low
cufflinks 3.858       High
cufflinks 1.217        
cufflinks 0.85        
cufflinks 2.67       High
cufflinks 1.728        
cufflinks 0.93        
cufflinks 5.90822 0.901941 10.9145   High
cufflinks 7.08208 1.86067 12.3035   High
cufflinks 2.42738 0.0 5.25991    
cufflinks 3.79557 0.643343 6.9478    
cufflinks 5.39061 1.0534 9.72781    

0 Strain