Gene : Cre08.g384864 C. reinhardtii v5.6
Defline:  (1 of 1) PF00018 - SH3 domain (SH3_1) Genomic Order:  699
Name:  ? Cre08.g384864 Secondary Identifier:  ? PAC:30774180
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre08.g384864 0.5kb upstream 0.5kb upstream 11669 true chromosome_8: 4874967-4886635 Chlamydomonas reinhardtii
Cre08.g384864 0.5kb upstream 0.5kb upstream 500 false chromosome_8: 4886136-4886635 Chlamydomonas reinhardtii
Cre08.g384864 0.5kb downstream 0.5kb downstream 11669 true chromosome_8: 4874467-4886135 Chlamydomonas reinhardtii
Cre08.g384864 0.5kb downstream 0.5kb downstream 500 false chromosome_8: 4874467-4874966 Chlamydomonas reinhardtii
Cre08.g384864 1.0kb upstream 1.0kb upstream 12169 true chromosome_8: 4874967-4887135 Chlamydomonas reinhardtii
Cre08.g384864 1.0kb upstream 1.0kb upstream 1000 false chromosome_8: 4886136-4887135 Chlamydomonas reinhardtii
Cre08.g384864 1.0kb downstream 1.0kb downstream 12169 true chromosome_8: 4873967-4886135 Chlamydomonas reinhardtii
Cre08.g384864 1.0kb downstream 1.0kb downstream 1000 false chromosome_8: 4873967-4874966 Chlamydomonas reinhardtii
Cre08.g384864 2.0kb upstream 2.0kb upstream 13169 true chromosome_8: 4874967-4888135 Chlamydomonas reinhardtii
Cre08.g384864 2.0kb upstream 2.0kb upstream 2000 false chromosome_8: 4886136-4888135 Chlamydomonas reinhardtii
Cre08.g384864 2.0kb downstream 2.0kb downstream 13169 true chromosome_8: 4872967-4886135 Chlamydomonas reinhardtii
Cre08.g384864 2.0kb downstream 2.0kb downstream 2000 false chromosome_8: 4872967-4874966 Chlamydomonas reinhardtii
Cre08.g384864 5.0kb upstream 5.0kb upstream 16169 true chromosome_8: 4874967-4891135 Chlamydomonas reinhardtii
Cre08.g384864 5.0kb upstream 5.0kb upstream 5000 false chromosome_8: 4886136-4891135 Chlamydomonas reinhardtii
Cre08.g384864 5.0kb downstream 5.0kb downstream 16169 true chromosome_8: 4869967-4886135 Chlamydomonas reinhardtii
Cre08.g384864 5.0kb downstream 5.0kb downstream 5000 false chromosome_8: 4869967-4874966 Chlamydomonas reinhardtii
Cre08.g384864 10.0kb upstream 10.0kb upstream 21169 true chromosome_8: 4874967-4896135 Chlamydomonas reinhardtii
Cre08.g384864 10.0kb upstream 10.0kb upstream 10000 false chromosome_8: 4886136-4896135 Chlamydomonas reinhardtii
Cre08.g384864 10.0kb downstream 10.0kb downstream 21169 true chromosome_8: 4864967-4886135 Chlamydomonas reinhardtii
Cre08.g384864 10.0kb downstream 10.0kb downstream 10000 false chromosome_8: 4864967-4874966 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112680 5260 Chlorophyte View MSA
123428583 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.298       Low
cufflinks 1.121       High
cufflinks 0.871        
cufflinks 0.913        
cufflinks 0.891        
cufflinks 0.795        
cufflinks 0.988        
cufflinks 0.991        
cufflinks 0.541        
cufflinks 0.405       Low
cufflinks 0.731        
cufflinks 0.754        
cufflinks 0.607        
cufflinks 0.861        
cufflinks 0.717        
cufflinks 0.508        
cufflinks 0.618        
cufflinks 0.995        
cufflinks 0.182       Low
cufflinks 0.72        
cufflinks 0.773        
cufflinks 0.498        
cufflinks 0.786        
cufflinks 0.89        
cufflinks 0.494        
cufflinks 7.48309 0.836926 14.1292    
cufflinks 8.47751 2.3054 14.6496    
cufflinks 5.62174 0.0 11.3891    
cufflinks 3.93777 0.657847 7.21769    
cufflinks 6.70721 1.34676 12.0677   High

0 Strain