Gene : Cre09.g387300 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR12707 - PINN Genomic Order:  460
Name:  ? Cre09.g387300 Secondary Identifier:  ? PAC:30781232
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre09.g387300 0.5kb upstream 0.5kb upstream 4178 true chromosome_9: 3048436-3052613 Chlamydomonas reinhardtii
Cre09.g387300 0.5kb upstream 0.5kb upstream 500 false chromosome_9: 3048436-3048935 Chlamydomonas reinhardtii
Cre09.g387300 0.5kb downstream 0.5kb downstream 4178 true chromosome_9: 3048936-3053113 Chlamydomonas reinhardtii
Cre09.g387300 0.5kb downstream 0.5kb downstream 500 false chromosome_9: 3052614-3053113 Chlamydomonas reinhardtii
Cre09.g387300 1.0kb upstream 1.0kb upstream 4678 true chromosome_9: 3047936-3052613 Chlamydomonas reinhardtii
Cre09.g387300 1.0kb upstream 1.0kb upstream 1000 false chromosome_9: 3047936-3048935 Chlamydomonas reinhardtii
Cre09.g387300 1.0kb downstream 1.0kb downstream 4678 true chromosome_9: 3048936-3053613 Chlamydomonas reinhardtii
Cre09.g387300 1.0kb downstream 1.0kb downstream 1000 false chromosome_9: 3052614-3053613 Chlamydomonas reinhardtii
Cre09.g387300 2.0kb upstream 2.0kb upstream 5678 true chromosome_9: 3046936-3052613 Chlamydomonas reinhardtii
Cre09.g387300 2.0kb upstream 2.0kb upstream 2000 false chromosome_9: 3046936-3048935 Chlamydomonas reinhardtii
Cre09.g387300 2.0kb downstream 2.0kb downstream 5678 true chromosome_9: 3048936-3054613 Chlamydomonas reinhardtii
Cre09.g387300 2.0kb downstream 2.0kb downstream 2000 false chromosome_9: 3052614-3054613 Chlamydomonas reinhardtii
Cre09.g387300 5.0kb upstream 5.0kb upstream 8678 true chromosome_9: 3043936-3052613 Chlamydomonas reinhardtii
Cre09.g387300 5.0kb upstream 5.0kb upstream 5000 false chromosome_9: 3043936-3048935 Chlamydomonas reinhardtii
Cre09.g387300 5.0kb downstream 5.0kb downstream 8678 true chromosome_9: 3048936-3057613 Chlamydomonas reinhardtii
Cre09.g387300 5.0kb downstream 5.0kb downstream 5000 false chromosome_9: 3052614-3057613 Chlamydomonas reinhardtii
Cre09.g387300 10.0kb upstream 10.0kb upstream 13678 true chromosome_9: 3038936-3052613 Chlamydomonas reinhardtii
Cre09.g387300 10.0kb upstream 10.0kb upstream 10000 false chromosome_9: 3038936-3048935 Chlamydomonas reinhardtii
Cre09.g387300 10.0kb downstream 10.0kb downstream 13678 true chromosome_9: 3048936-3062613 Chlamydomonas reinhardtii
Cre09.g387300 10.0kb downstream 10.0kb downstream 10000 false chromosome_9: 3052614-3062613 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124093437 5260 Chlorophyte View MSA
123426416 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.647       Low
cufflinks 1.642       High
cufflinks 0.78        
cufflinks 0.857        
cufflinks 1.344       High
cufflinks 1.246        
cufflinks 1.517       High
cufflinks 1.152        
cufflinks 1.215        
cufflinks 0.764        
cufflinks 0.522       Low
cufflinks 1.11        
cufflinks 1.046        
cufflinks 1.432       High
cufflinks 0.892        
cufflinks 1.445       High
cufflinks 1.032        
cufflinks 1.024        
cufflinks 0.692       Low
cufflinks 1.117        
cufflinks 0.89        
cufflinks 0.927        
cufflinks 1.12        
cufflinks 0.994        
cufflinks 0.669       Low
cufflinks 5.91167 1.00453 10.8188    
cufflinks 7.49235 1.78797 13.1967   High
cufflinks 2.21758 0.0 5.08138    
cufflinks 3.38609 0.448581 6.32359    
cufflinks 4.42172 0.644902 8.19854   High

0 Strain