Gene : Cre08.g364250 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR22504 - REPRESSOR OF RNA POLYMERASE III TRANSCRIPTION MAF1 Genomic Order:  201
Name:  ? Cre08.g364250 Secondary Identifier:  ? PAC:30773907
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre08.g364250 0.5kb upstream 0.5kb upstream 4368 true chromosome_8: 1409510-1413877 Chlamydomonas reinhardtii
Cre08.g364250 0.5kb upstream 0.5kb upstream 500 false chromosome_8: 1409510-1410009 Chlamydomonas reinhardtii
Cre08.g364250 0.5kb downstream 0.5kb downstream 4368 true chromosome_8: 1410010-1414377 Chlamydomonas reinhardtii
Cre08.g364250 0.5kb downstream 0.5kb downstream 500 false chromosome_8: 1413878-1414377 Chlamydomonas reinhardtii
Cre08.g364250 1.0kb upstream 1.0kb upstream 4868 true chromosome_8: 1409010-1413877 Chlamydomonas reinhardtii
Cre08.g364250 1.0kb upstream 1.0kb upstream 1000 false chromosome_8: 1409010-1410009 Chlamydomonas reinhardtii
Cre08.g364250 1.0kb downstream 1.0kb downstream 4868 true chromosome_8: 1410010-1414877 Chlamydomonas reinhardtii
Cre08.g364250 1.0kb downstream 1.0kb downstream 1000 false chromosome_8: 1413878-1414877 Chlamydomonas reinhardtii
Cre08.g364250 2.0kb upstream 2.0kb upstream 5868 true chromosome_8: 1408010-1413877 Chlamydomonas reinhardtii
Cre08.g364250 2.0kb upstream 2.0kb upstream 2000 false chromosome_8: 1408010-1410009 Chlamydomonas reinhardtii
Cre08.g364250 2.0kb downstream 2.0kb downstream 5868 true chromosome_8: 1410010-1415877 Chlamydomonas reinhardtii
Cre08.g364250 2.0kb downstream 2.0kb downstream 2000 false chromosome_8: 1413878-1415877 Chlamydomonas reinhardtii
Cre08.g364250 5.0kb upstream 5.0kb upstream 8868 true chromosome_8: 1405010-1413877 Chlamydomonas reinhardtii
Cre08.g364250 5.0kb upstream 5.0kb upstream 5000 false chromosome_8: 1405010-1410009 Chlamydomonas reinhardtii
Cre08.g364250 5.0kb downstream 5.0kb downstream 8868 true chromosome_8: 1410010-1418877 Chlamydomonas reinhardtii
Cre08.g364250 5.0kb downstream 5.0kb downstream 5000 false chromosome_8: 1413878-1418877 Chlamydomonas reinhardtii
Cre08.g364250 10.0kb upstream 10.0kb upstream 13868 true chromosome_8: 1400010-1413877 Chlamydomonas reinhardtii
Cre08.g364250 10.0kb upstream 10.0kb upstream 10000 false chromosome_8: 1400010-1410009 Chlamydomonas reinhardtii
Cre08.g364250 10.0kb downstream 10.0kb downstream 13868 true chromosome_8: 1410010-1423877 Chlamydomonas reinhardtii
Cre08.g364250 10.0kb downstream 10.0kb downstream 10000 false chromosome_8: 1413878-1423877 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109193 5260 Chlorophyte View MSA
123424535 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.598     High  
cufflinks 17.776     High  
cufflinks 14.166        
cufflinks 18.687     High  
cufflinks 17.429     High  
cufflinks 14.087     High  
cufflinks 23.374     High  
cufflinks 19.793     High  
cufflinks 14.875     High  
cufflinks 6.165       Low
cufflinks 15.748     High  
cufflinks 23.392     High  
cufflinks 10.882     High Low
cufflinks 17.909     High  
cufflinks 18.257     High  
cufflinks 17.56     High  
cufflinks 26.877     High High
cufflinks 14.397     High  
cufflinks 6.168     High Low
cufflinks 39.013     High High
cufflinks 16.167     High  
cufflinks 25.589     High  
cufflinks 26.106     High  
cufflinks 19.309     High  
cufflinks 26.826     High High
cufflinks 35.7905 0.379923 71.2011 High  
cufflinks 17.2002 4.69686 29.7036    
cufflinks 41.1069 0.0 84.319 High  
cufflinks 21.4632 1.37252 41.5539    
cufflinks 17.2037 3.11299 31.2943   Low

0 Strain