Gene : VPS52 C. reinhardtii v5.6
Primary Identifier:  ? Cre08.g367200 Defline:  (1 of 1) PTHR14190:SF7 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 52 HOMOLOG
Genomic Order:  275 Name:  ? Cre08.g367200
Secondary Identifier:  ? PAC:30773844
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre08.g367200 0.5kb upstream 0.5kb upstream 9973 true chromosome_8: 1902251-1912223 Chlamydomonas reinhardtii
Cre08.g367200 0.5kb upstream 0.5kb upstream 500 false chromosome_8: 1911724-1912223 Chlamydomonas reinhardtii
Cre08.g367200 0.5kb downstream 0.5kb downstream 9973 true chromosome_8: 1901751-1911723 Chlamydomonas reinhardtii
Cre08.g367200 0.5kb downstream 0.5kb downstream 500 false chromosome_8: 1901751-1902250 Chlamydomonas reinhardtii
Cre08.g367200 1.0kb upstream 1.0kb upstream 10473 true chromosome_8: 1902251-1912723 Chlamydomonas reinhardtii
Cre08.g367200 1.0kb upstream 1.0kb upstream 1000 false chromosome_8: 1911724-1912723 Chlamydomonas reinhardtii
Cre08.g367200 1.0kb downstream 1.0kb downstream 10473 true chromosome_8: 1901251-1911723 Chlamydomonas reinhardtii
Cre08.g367200 1.0kb downstream 1.0kb downstream 1000 false chromosome_8: 1901251-1902250 Chlamydomonas reinhardtii
Cre08.g367200 2.0kb upstream 2.0kb upstream 11473 true chromosome_8: 1902251-1913723 Chlamydomonas reinhardtii
Cre08.g367200 2.0kb upstream 2.0kb upstream 2000 false chromosome_8: 1911724-1913723 Chlamydomonas reinhardtii
Cre08.g367200 2.0kb downstream 2.0kb downstream 11473 true chromosome_8: 1900251-1911723 Chlamydomonas reinhardtii
Cre08.g367200 2.0kb downstream 2.0kb downstream 2000 false chromosome_8: 1900251-1902250 Chlamydomonas reinhardtii
Cre08.g367200 5.0kb upstream 5.0kb upstream 14473 true chromosome_8: 1902251-1916723 Chlamydomonas reinhardtii
Cre08.g367200 5.0kb upstream 5.0kb upstream 5000 false chromosome_8: 1911724-1916723 Chlamydomonas reinhardtii
Cre08.g367200 5.0kb downstream 5.0kb downstream 14473 true chromosome_8: 1897251-1911723 Chlamydomonas reinhardtii
Cre08.g367200 5.0kb downstream 5.0kb downstream 5000 false chromosome_8: 1897251-1902250 Chlamydomonas reinhardtii
Cre08.g367200 10.0kb upstream 10.0kb upstream 19473 true chromosome_8: 1902251-1921723 Chlamydomonas reinhardtii
Cre08.g367200 10.0kb upstream 10.0kb upstream 10000 false chromosome_8: 1911724-1921723 Chlamydomonas reinhardtii
Cre08.g367200 10.0kb downstream 10.0kb downstream 19473 true chromosome_8: 1892251-1911723 Chlamydomonas reinhardtii
Cre08.g367200 10.0kb downstream 10.0kb downstream 10000 false chromosome_8: 1892251-1902250 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110388 5260 Chlorophyte View MSA
123425999 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.057        
cufflinks 4.512       High
cufflinks 1.751        
cufflinks 2.448        
cufflinks 3.747        
cufflinks 3.405        
cufflinks 3.948        
cufflinks 3.553        
cufflinks 2.325        
cufflinks 0.632       Low
cufflinks 1.661        
cufflinks 3.595        
cufflinks 1.258       Low
cufflinks 3.627        
cufflinks 2.611        
cufflinks 3.497        
cufflinks 2.643        
cufflinks 2.414        
cufflinks 0.64       Low
cufflinks 3.025        
cufflinks 2.612        
cufflinks 2.998        
cufflinks 3.444        
cufflinks 3.125        
cufflinks 3.22        
cufflinks 15.1101 0.739874 29.4803    
cufflinks 18.5892 4.88197 32.2964   High
cufflinks 14.4305 0.0 29.1459    
cufflinks 9.77322 0.906179 18.6403   Low
cufflinks 23.1168 2.91459 43.319   High

0 Strain