Gene : CGLD6 C. reinhardtii v5.6
Primary Identifier:  ? Cre08.g372000 Defline:  conserved protein
Genomic Order:  380 Name:  ? Cre08.g372000
Secondary Identifier:  ? PAC:30773352
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre08.g372000 0.5kb upstream 0.5kb upstream 5362 true chromosome_8: 2509058-2514419 Chlamydomonas reinhardtii
Cre08.g372000 0.5kb upstream 0.5kb upstream 500 false chromosome_8: 2509058-2509557 Chlamydomonas reinhardtii
Cre08.g372000 0.5kb downstream 0.5kb downstream 5362 true chromosome_8: 2509558-2514919 Chlamydomonas reinhardtii
Cre08.g372000 0.5kb downstream 0.5kb downstream 500 false chromosome_8: 2514420-2514919 Chlamydomonas reinhardtii
Cre08.g372000 1.0kb upstream 1.0kb upstream 5862 true chromosome_8: 2508558-2514419 Chlamydomonas reinhardtii
Cre08.g372000 1.0kb upstream 1.0kb upstream 1000 false chromosome_8: 2508558-2509557 Chlamydomonas reinhardtii
Cre08.g372000 1.0kb downstream 1.0kb downstream 5862 true chromosome_8: 2509558-2515419 Chlamydomonas reinhardtii
Cre08.g372000 1.0kb downstream 1.0kb downstream 1000 false chromosome_8: 2514420-2515419 Chlamydomonas reinhardtii
Cre08.g372000 2.0kb upstream 2.0kb upstream 6862 true chromosome_8: 2507558-2514419 Chlamydomonas reinhardtii
Cre08.g372000 2.0kb upstream 2.0kb upstream 2000 false chromosome_8: 2507558-2509557 Chlamydomonas reinhardtii
Cre08.g372000 2.0kb downstream 2.0kb downstream 6862 true chromosome_8: 2509558-2516419 Chlamydomonas reinhardtii
Cre08.g372000 2.0kb downstream 2.0kb downstream 2000 false chromosome_8: 2514420-2516419 Chlamydomonas reinhardtii
Cre08.g372000 5.0kb upstream 5.0kb upstream 9862 true chromosome_8: 2504558-2514419 Chlamydomonas reinhardtii
Cre08.g372000 5.0kb upstream 5.0kb upstream 5000 false chromosome_8: 2504558-2509557 Chlamydomonas reinhardtii
Cre08.g372000 5.0kb downstream 5.0kb downstream 9862 true chromosome_8: 2509558-2519419 Chlamydomonas reinhardtii
Cre08.g372000 5.0kb downstream 5.0kb downstream 5000 false chromosome_8: 2514420-2519419 Chlamydomonas reinhardtii
Cre08.g372000 10.0kb upstream 10.0kb upstream 14862 true chromosome_8: 2499558-2514419 Chlamydomonas reinhardtii
Cre08.g372000 10.0kb upstream 10.0kb upstream 10000 false chromosome_8: 2499558-2509557 Chlamydomonas reinhardtii
Cre08.g372000 10.0kb downstream 10.0kb downstream 14862 true chromosome_8: 2509558-2524419 Chlamydomonas reinhardtii
Cre08.g372000 10.0kb downstream 10.0kb downstream 10000 false chromosome_8: 2514420-2524419 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108745 5260 Chlorophyte View MSA
123425559 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.234        
cufflinks 6.754        
cufflinks 2.496        
cufflinks 4.212        
cufflinks 7.181        
cufflinks 7.001        
cufflinks 1.513       Low
cufflinks 3.871        
cufflinks 12.352     High High
cufflinks 3.048        
cufflinks 3.149        
cufflinks 5.699        
cufflinks 2.091        
cufflinks 7.606        
cufflinks 4.18        
cufflinks 15.669     High High
cufflinks 13.827     High High
cufflinks 5.096        
cufflinks 0.302       Low
cufflinks 1.822       Low
cufflinks 5.031        
cufflinks 10.563        
cufflinks 3.058        
cufflinks 4.456        
cufflinks 12.768     High High
cufflinks 24.1522 1.42517 46.8792   Low
cufflinks 26.1445 6.68673 45.6023    
cufflinks 6.91313 0.0 14.0951    
cufflinks 13.1216 1.52083 24.7223   Low
cufflinks 22.0044 3.58677 40.422    

0 Strain