Gene : Cre08.g376500 C. reinhardtii v5.6
Defline:  (1 of 2) PTHR22993//PTHR22993:SF18 - FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE // SUBFAMILY NOT NAMED Genomic Order:  516
Name:  ? Cre08.g376500 Secondary Identifier:  ? PAC:30774031
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre08.g376500 0.5kb upstream 0.5kb upstream 3192 true chromosome_8: 3651219-3654410 Chlamydomonas reinhardtii
Cre08.g376500 0.5kb upstream 0.5kb upstream 500 false chromosome_8: 3651219-3651718 Chlamydomonas reinhardtii
Cre08.g376500 0.5kb downstream 0.5kb downstream 3192 true chromosome_8: 3651719-3654910 Chlamydomonas reinhardtii
Cre08.g376500 0.5kb downstream 0.5kb downstream 500 false chromosome_8: 3654411-3654910 Chlamydomonas reinhardtii
Cre08.g376500 1.0kb upstream 1.0kb upstream 3692 true chromosome_8: 3650719-3654410 Chlamydomonas reinhardtii
Cre08.g376500 1.0kb upstream 1.0kb upstream 1000 false chromosome_8: 3650719-3651718 Chlamydomonas reinhardtii
Cre08.g376500 1.0kb downstream 1.0kb downstream 3692 true chromosome_8: 3651719-3655410 Chlamydomonas reinhardtii
Cre08.g376500 1.0kb downstream 1.0kb downstream 1000 false chromosome_8: 3654411-3655410 Chlamydomonas reinhardtii
Cre08.g376500 2.0kb upstream 2.0kb upstream 4692 true chromosome_8: 3649719-3654410 Chlamydomonas reinhardtii
Cre08.g376500 2.0kb upstream 2.0kb upstream 2000 false chromosome_8: 3649719-3651718 Chlamydomonas reinhardtii
Cre08.g376500 2.0kb downstream 2.0kb downstream 4692 true chromosome_8: 3651719-3656410 Chlamydomonas reinhardtii
Cre08.g376500 2.0kb downstream 2.0kb downstream 2000 false chromosome_8: 3654411-3656410 Chlamydomonas reinhardtii
Cre08.g376500 5.0kb upstream 5.0kb upstream 7692 true chromosome_8: 3646719-3654410 Chlamydomonas reinhardtii
Cre08.g376500 5.0kb upstream 5.0kb upstream 5000 false chromosome_8: 3646719-3651718 Chlamydomonas reinhardtii
Cre08.g376500 5.0kb downstream 5.0kb downstream 7692 true chromosome_8: 3651719-3659410 Chlamydomonas reinhardtii
Cre08.g376500 5.0kb downstream 5.0kb downstream 5000 false chromosome_8: 3654411-3659410 Chlamydomonas reinhardtii
Cre08.g376500 10.0kb upstream 10.0kb upstream 12692 true chromosome_8: 3641719-3654410 Chlamydomonas reinhardtii
Cre08.g376500 10.0kb upstream 10.0kb upstream 10000 false chromosome_8: 3641719-3651718 Chlamydomonas reinhardtii
Cre08.g376500 10.0kb downstream 10.0kb downstream 12692 true chromosome_8: 3651719-3664410 Chlamydomonas reinhardtii
Cre08.g376500 10.0kb downstream 10.0kb downstream 10000 false chromosome_8: 3654411-3664410 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112645 5260 Chlorophyte View MSA
123427632 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.126       Low
cufflinks 0.718        
cufflinks 0.442        
cufflinks 0.488        
cufflinks 0.546        
cufflinks 0.349        
cufflinks 0.862       High
cufflinks 0.735       High
cufflinks 0.109       Low
cufflinks 0.038     Low Low
cufflinks 0.431        
cufflinks 0.637        
cufflinks 0.079     Low Low
cufflinks 0.444        
cufflinks 0.329        
cufflinks 0.287        
cufflinks 0.452        
cufflinks 0.468        
cufflinks 0.043     Low Low
cufflinks 0.24        
cufflinks 0.342        
cufflinks 0.449        
cufflinks 0.295        
cufflinks 0.628        
cufflinks 0.341        
cufflinks 2.14902 0.0 4.32316    
cufflinks 2.78647 0.0 6.20132   High
cufflinks 0.723898 0.0 2.20125   Low
cufflinks 1.18288 0.0 2.48436   Low
cufflinks 1.5094 0.0 3.35737   High

0 Strain