Gene : ATF1 C. reinhardtii v5.6
Primary Identifier:  ? Cre08.g375500 Defline:  (1 of 1) 2.6.1.16 - Glutamine--fructose-6-phosphate transaminase (isomerizing) / L-glutamine-D-fructose-6-phosphate amidotransferase
Genomic Order:  494 Name:  ? Cre08.g375500
Secondary Identifier:  ? PAC:30773556
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii UDPNACETYLGALSYN-PWY Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre08.g375500 0.5kb upstream 0.5kb upstream 9116 true chromosome_8: 3547383-3556498 Chlamydomonas reinhardtii
Cre08.g375500 0.5kb upstream 0.5kb upstream 500 false chromosome_8: 3555999-3556498 Chlamydomonas reinhardtii
Cre08.g375500 0.5kb downstream 0.5kb downstream 9116 true chromosome_8: 3546883-3555998 Chlamydomonas reinhardtii
Cre08.g375500 0.5kb downstream 0.5kb downstream 500 false chromosome_8: 3546883-3547382 Chlamydomonas reinhardtii
Cre08.g375500 1.0kb upstream 1.0kb upstream 9616 true chromosome_8: 3547383-3556998 Chlamydomonas reinhardtii
Cre08.g375500 1.0kb upstream 1.0kb upstream 1000 false chromosome_8: 3555999-3556998 Chlamydomonas reinhardtii
Cre08.g375500 1.0kb downstream 1.0kb downstream 9616 true chromosome_8: 3546383-3555998 Chlamydomonas reinhardtii
Cre08.g375500 1.0kb downstream 1.0kb downstream 1000 false chromosome_8: 3546383-3547382 Chlamydomonas reinhardtii
Cre08.g375500 2.0kb upstream 2.0kb upstream 10616 true chromosome_8: 3547383-3557998 Chlamydomonas reinhardtii
Cre08.g375500 2.0kb upstream 2.0kb upstream 2000 false chromosome_8: 3555999-3557998 Chlamydomonas reinhardtii
Cre08.g375500 2.0kb downstream 2.0kb downstream 10616 true chromosome_8: 3545383-3555998 Chlamydomonas reinhardtii
Cre08.g375500 2.0kb downstream 2.0kb downstream 2000 false chromosome_8: 3545383-3547382 Chlamydomonas reinhardtii
Cre08.g375500 5.0kb upstream 5.0kb upstream 13616 true chromosome_8: 3547383-3560998 Chlamydomonas reinhardtii
Cre08.g375500 5.0kb upstream 5.0kb upstream 5000 false chromosome_8: 3555999-3560998 Chlamydomonas reinhardtii
Cre08.g375500 5.0kb downstream 5.0kb downstream 13616 true chromosome_8: 3542383-3555998 Chlamydomonas reinhardtii
Cre08.g375500 5.0kb downstream 5.0kb downstream 5000 false chromosome_8: 3542383-3547382 Chlamydomonas reinhardtii
Cre08.g375500 10.0kb upstream 10.0kb upstream 18616 true chromosome_8: 3547383-3565998 Chlamydomonas reinhardtii
Cre08.g375500 10.0kb upstream 10.0kb upstream 10000 false chromosome_8: 3555999-3565998 Chlamydomonas reinhardtii
Cre08.g375500 10.0kb downstream 10.0kb downstream 18616 true chromosome_8: 3537383-3555998 Chlamydomonas reinhardtii
Cre08.g375500 10.0kb downstream 10.0kb downstream 10000 false chromosome_8: 3537383-3547382 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110073 5260 Chlorophyte View MSA
123424089 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.871        
cufflinks 3.772        
cufflinks 3.201        
cufflinks 3.921        
cufflinks 3.246        
cufflinks 2.932        
cufflinks 4.003        
cufflinks 4.628        
cufflinks 2.212        
cufflinks 0.796       Low
cufflinks 2.881        
cufflinks 3.934        
cufflinks 1.299       Low
cufflinks 3.091        
cufflinks 2.795        
cufflinks 3.045        
cufflinks 3.885        
cufflinks 3.396        
cufflinks 0.421       Low
cufflinks 3.859        
cufflinks 2.296        
cufflinks 3.424        
cufflinks 5.109       High
cufflinks 4.109        
cufflinks 4.0        
cufflinks 15.2433 0.531183 29.9554   Low
cufflinks 5.78426 1.55229 10.0162   Low
cufflinks 6.64974 0.0 13.3628    
cufflinks 6.13553 0.762876 11.5082   Low
cufflinks 7.20712 1.34548 13.0688   High

0 Strain