Gene : Cre09.g396401 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR21091:SF16 - SIROHEME SYNTHASE Genomic Order:  729
Name:  ? Cre09.g396401 Secondary Identifier:  ? PAC:30781431
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre09.g396401 0.5kb upstream 0.5kb upstream 4232 true chromosome_9: 4586470-4590701 Chlamydomonas reinhardtii
Cre09.g396401 0.5kb upstream 0.5kb upstream 500 false chromosome_9: 4586470-4586969 Chlamydomonas reinhardtii
Cre09.g396401 0.5kb downstream 0.5kb downstream 4232 true chromosome_9: 4586970-4591201 Chlamydomonas reinhardtii
Cre09.g396401 0.5kb downstream 0.5kb downstream 500 false chromosome_9: 4590702-4591201 Chlamydomonas reinhardtii
Cre09.g396401 1.0kb upstream 1.0kb upstream 4732 true chromosome_9: 4585970-4590701 Chlamydomonas reinhardtii
Cre09.g396401 1.0kb upstream 1.0kb upstream 1000 false chromosome_9: 4585970-4586969 Chlamydomonas reinhardtii
Cre09.g396401 1.0kb downstream 1.0kb downstream 4732 true chromosome_9: 4586970-4591701 Chlamydomonas reinhardtii
Cre09.g396401 1.0kb downstream 1.0kb downstream 1000 false chromosome_9: 4590702-4591701 Chlamydomonas reinhardtii
Cre09.g396401 2.0kb upstream 2.0kb upstream 5732 true chromosome_9: 4584970-4590701 Chlamydomonas reinhardtii
Cre09.g396401 2.0kb upstream 2.0kb upstream 2000 false chromosome_9: 4584970-4586969 Chlamydomonas reinhardtii
Cre09.g396401 2.0kb downstream 2.0kb downstream 5732 true chromosome_9: 4586970-4592701 Chlamydomonas reinhardtii
Cre09.g396401 2.0kb downstream 2.0kb downstream 2000 false chromosome_9: 4590702-4592701 Chlamydomonas reinhardtii
Cre09.g396401 5.0kb upstream 5.0kb upstream 8732 true chromosome_9: 4581970-4590701 Chlamydomonas reinhardtii
Cre09.g396401 5.0kb upstream 5.0kb upstream 5000 false chromosome_9: 4581970-4586969 Chlamydomonas reinhardtii
Cre09.g396401 5.0kb downstream 5.0kb downstream 8732 true chromosome_9: 4586970-4595701 Chlamydomonas reinhardtii
Cre09.g396401 5.0kb downstream 5.0kb downstream 5000 false chromosome_9: 4590702-4595701 Chlamydomonas reinhardtii
Cre09.g396401 10.0kb upstream 10.0kb upstream 13732 true chromosome_9: 4576970-4590701 Chlamydomonas reinhardtii
Cre09.g396401 10.0kb upstream 10.0kb upstream 10000 false chromosome_9: 4576970-4586969 Chlamydomonas reinhardtii
Cre09.g396401 10.0kb downstream 10.0kb downstream 13732 true chromosome_9: 4586970-4600701 Chlamydomonas reinhardtii
Cre09.g396401 10.0kb downstream 10.0kb downstream 10000 false chromosome_9: 4590702-4600701 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110280 5260 Chlorophyte View MSA
123426668 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.582     High  
cufflinks 9.199        
cufflinks 16.931     High High
cufflinks 11.379        
cufflinks 11.736        
cufflinks 5.132        
cufflinks 6.758        
cufflinks 8.914        
cufflinks 1.874        
cufflinks 1.495        
cufflinks 18.975     High High
cufflinks 2.492        
cufflinks 13.891     High High
cufflinks 3.691        
cufflinks 6.841        
cufflinks 2.201        
cufflinks 0.219       Low
cufflinks 10.193        
cufflinks 0.353       Low
cufflinks 0.566       Low
cufflinks 3.744        
cufflinks 3.147        
cufflinks 1.584        
cufflinks 14.622       High
cufflinks 0.462       Low
cufflinks 59.3873 0.0 120.288 High High
cufflinks 13.633 3.72345 23.5425    
cufflinks 2.7672 0.0 6.11575   Low
cufflinks 3.58374 0.495169 6.67232   Low
cufflinks 9.36439 1.86484 16.8639    

0 Strain