Gene : CCT6 C. reinhardtii v5.6
Primary Identifier:  ? Cre09.g397200 Defline:  (1 of 1) K09498 - T-complex protein 1 subunit zeta (CCT6)
Genomic Order:  243 Name:  ? Cre09.g397200
Secondary Identifier:  ? PAC:30780237
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre09.g397200 0.5kb upstream 0.5kb upstream 5803 true chromosome_9: 1630379-1636181 Chlamydomonas reinhardtii
Cre09.g397200 0.5kb upstream 0.5kb upstream 500 false chromosome_9: 1635682-1636181 Chlamydomonas reinhardtii
Cre09.g397200 0.5kb downstream 0.5kb downstream 5803 true chromosome_9: 1629879-1635681 Chlamydomonas reinhardtii
Cre09.g397200 0.5kb downstream 0.5kb downstream 500 false chromosome_9: 1629879-1630378 Chlamydomonas reinhardtii
Cre09.g397200 1.0kb upstream 1.0kb upstream 6303 true chromosome_9: 1630379-1636681 Chlamydomonas reinhardtii
Cre09.g397200 1.0kb upstream 1.0kb upstream 1000 false chromosome_9: 1635682-1636681 Chlamydomonas reinhardtii
Cre09.g397200 1.0kb downstream 1.0kb downstream 6303 true chromosome_9: 1629379-1635681 Chlamydomonas reinhardtii
Cre09.g397200 1.0kb downstream 1.0kb downstream 1000 false chromosome_9: 1629379-1630378 Chlamydomonas reinhardtii
Cre09.g397200 2.0kb upstream 2.0kb upstream 7303 true chromosome_9: 1630379-1637681 Chlamydomonas reinhardtii
Cre09.g397200 2.0kb upstream 2.0kb upstream 2000 false chromosome_9: 1635682-1637681 Chlamydomonas reinhardtii
Cre09.g397200 2.0kb downstream 2.0kb downstream 7303 true chromosome_9: 1628379-1635681 Chlamydomonas reinhardtii
Cre09.g397200 2.0kb downstream 2.0kb downstream 2000 false chromosome_9: 1628379-1630378 Chlamydomonas reinhardtii
Cre09.g397200 5.0kb upstream 5.0kb upstream 10303 true chromosome_9: 1630379-1640681 Chlamydomonas reinhardtii
Cre09.g397200 5.0kb upstream 5.0kb upstream 5000 false chromosome_9: 1635682-1640681 Chlamydomonas reinhardtii
Cre09.g397200 5.0kb downstream 5.0kb downstream 10303 true chromosome_9: 1625379-1635681 Chlamydomonas reinhardtii
Cre09.g397200 5.0kb downstream 5.0kb downstream 5000 false chromosome_9: 1625379-1630378 Chlamydomonas reinhardtii
Cre09.g397200 10.0kb upstream 10.0kb upstream 15303 true chromosome_9: 1630379-1645681 Chlamydomonas reinhardtii
Cre09.g397200 10.0kb upstream 10.0kb upstream 10000 false chromosome_9: 1635682-1645681 Chlamydomonas reinhardtii
Cre09.g397200 10.0kb downstream 10.0kb downstream 15303 true chromosome_9: 1620379-1635681 Chlamydomonas reinhardtii
Cre09.g397200 10.0kb downstream 10.0kb downstream 10000 false chromosome_9: 1620379-1630378 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109646 5260 Chlorophyte View MSA
123424625 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.583        
cufflinks 18.899     High High
cufflinks 17.832     High  
cufflinks 13.517        
cufflinks 16.454     High  
cufflinks 13.284     High  
cufflinks 19.091     High High
cufflinks 16.221     High  
cufflinks 7.095        
cufflinks 4.555        
cufflinks 12.66        
cufflinks 12.615        
cufflinks 7.568        
cufflinks 14.113     High  
cufflinks 9.792        
cufflinks 7.873        
cufflinks 1.369       Low
cufflinks 13.747     High  
cufflinks 2.954       Low
cufflinks 7.76        
cufflinks 8.901        
cufflinks 1.52       Low
cufflinks 10.381        
cufflinks 12.101        
cufflinks 1.465       Low
cufflinks 38.788 0.0 77.8481 High Low
cufflinks 45.7983 10.9507 80.6459 High  
cufflinks 20.186 0.0 40.6747   Low
cufflinks 22.4986 1.12007 43.8772 High Low
cufflinks 41.3571 4.87605 77.8381 High  

0 Strain