Gene : Cre09.g398550 C. reinhardtii v5.6
Defline:  (1 of 1) K14571 - ribosome biogenesis ATPase (RIX7, NVL) Genomic Order:  213
Name:  ? Cre09.g398550 Secondary Identifier:  ? PAC:30781371
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre09.g398550 0.5kb upstream 0.5kb upstream 6806 true chromosome_9: 1404023-1410828 Chlamydomonas reinhardtii
Cre09.g398550 0.5kb upstream 0.5kb upstream 500 false chromosome_9: 1410329-1410828 Chlamydomonas reinhardtii
Cre09.g398550 0.5kb downstream 0.5kb downstream 6806 true chromosome_9: 1403523-1410328 Chlamydomonas reinhardtii
Cre09.g398550 0.5kb downstream 0.5kb downstream 500 false chromosome_9: 1403523-1404022 Chlamydomonas reinhardtii
Cre09.g398550 1.0kb upstream 1.0kb upstream 7306 true chromosome_9: 1404023-1411328 Chlamydomonas reinhardtii
Cre09.g398550 1.0kb upstream 1.0kb upstream 1000 false chromosome_9: 1410329-1411328 Chlamydomonas reinhardtii
Cre09.g398550 1.0kb downstream 1.0kb downstream 7306 true chromosome_9: 1403023-1410328 Chlamydomonas reinhardtii
Cre09.g398550 1.0kb downstream 1.0kb downstream 1000 false chromosome_9: 1403023-1404022 Chlamydomonas reinhardtii
Cre09.g398550 2.0kb upstream 2.0kb upstream 8306 true chromosome_9: 1404023-1412328 Chlamydomonas reinhardtii
Cre09.g398550 2.0kb upstream 2.0kb upstream 2000 false chromosome_9: 1410329-1412328 Chlamydomonas reinhardtii
Cre09.g398550 2.0kb downstream 2.0kb downstream 8306 true chromosome_9: 1402023-1410328 Chlamydomonas reinhardtii
Cre09.g398550 2.0kb downstream 2.0kb downstream 2000 false chromosome_9: 1402023-1404022 Chlamydomonas reinhardtii
Cre09.g398550 5.0kb upstream 5.0kb upstream 11306 true chromosome_9: 1404023-1415328 Chlamydomonas reinhardtii
Cre09.g398550 5.0kb upstream 5.0kb upstream 5000 false chromosome_9: 1410329-1415328 Chlamydomonas reinhardtii
Cre09.g398550 5.0kb downstream 5.0kb downstream 11306 true chromosome_9: 1399023-1410328 Chlamydomonas reinhardtii
Cre09.g398550 5.0kb downstream 5.0kb downstream 5000 false chromosome_9: 1399023-1404022 Chlamydomonas reinhardtii
Cre09.g398550 10.0kb upstream 10.0kb upstream 16306 true chromosome_9: 1404023-1420328 Chlamydomonas reinhardtii
Cre09.g398550 10.0kb upstream 10.0kb upstream 10000 false chromosome_9: 1410329-1420328 Chlamydomonas reinhardtii
Cre09.g398550 10.0kb downstream 10.0kb downstream 16306 true chromosome_9: 1394023-1410328 Chlamydomonas reinhardtii
Cre09.g398550 10.0kb downstream 10.0kb downstream 10000 false chromosome_9: 1394023-1404022 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113314 5260 Chlorophyte View MSA
123426108 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.926        
cufflinks 2.447       High
cufflinks 1.275        
cufflinks 1.629        
cufflinks 1.619        
cufflinks 1.627        
cufflinks 2.361       High
cufflinks 1.883        
cufflinks 1.322        
cufflinks 0.676       Low
cufflinks 1.619        
cufflinks 1.89        
cufflinks 0.866       Low
cufflinks 1.572        
cufflinks 1.556        
cufflinks 1.817        
cufflinks 0.519       Low
cufflinks 1.507        
cufflinks 0.834       Low
cufflinks 1.669        
cufflinks 1.805        
cufflinks 0.714       Low
cufflinks 1.874        
cufflinks 1.776        
cufflinks 0.606       Low
cufflinks 9.62436 0.845659 18.4031   High
cufflinks 7.90712 2.15371 13.6605   High
cufflinks 1.87833 0.0 4.11469   Low
cufflinks 4.97477 0.749814 9.19973   Low
cufflinks 5.15381 1.02233 9.2853    

0 Strain