Gene : Cre09.g392000 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR16092 - SEC3/SYNTAXIN-RELATED Genomic Order:  356
Name:  ? Cre09.g392000 Secondary Identifier:  ? PAC:30781372
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre09.g392000 0.5kb upstream 0.5kb upstream 16132 true chromosome_9: 2355431-2371562 Chlamydomonas reinhardtii
Cre09.g392000 0.5kb upstream 0.5kb upstream 500 false chromosome_9: 2355431-2355930 Chlamydomonas reinhardtii
Cre09.g392000 0.5kb downstream 0.5kb downstream 16132 true chromosome_9: 2355931-2372062 Chlamydomonas reinhardtii
Cre09.g392000 0.5kb downstream 0.5kb downstream 500 false chromosome_9: 2371563-2372062 Chlamydomonas reinhardtii
Cre09.g392000 1.0kb upstream 1.0kb upstream 16632 true chromosome_9: 2354931-2371562 Chlamydomonas reinhardtii
Cre09.g392000 1.0kb upstream 1.0kb upstream 1000 false chromosome_9: 2354931-2355930 Chlamydomonas reinhardtii
Cre09.g392000 1.0kb downstream 1.0kb downstream 16632 true chromosome_9: 2355931-2372562 Chlamydomonas reinhardtii
Cre09.g392000 1.0kb downstream 1.0kb downstream 1000 false chromosome_9: 2371563-2372562 Chlamydomonas reinhardtii
Cre09.g392000 2.0kb upstream 2.0kb upstream 17632 true chromosome_9: 2353931-2371562 Chlamydomonas reinhardtii
Cre09.g392000 2.0kb upstream 2.0kb upstream 2000 false chromosome_9: 2353931-2355930 Chlamydomonas reinhardtii
Cre09.g392000 2.0kb downstream 2.0kb downstream 17632 true chromosome_9: 2355931-2373562 Chlamydomonas reinhardtii
Cre09.g392000 2.0kb downstream 2.0kb downstream 2000 false chromosome_9: 2371563-2373562 Chlamydomonas reinhardtii
Cre09.g392000 5.0kb upstream 5.0kb upstream 20632 true chromosome_9: 2350931-2371562 Chlamydomonas reinhardtii
Cre09.g392000 5.0kb upstream 5.0kb upstream 5000 false chromosome_9: 2350931-2355930 Chlamydomonas reinhardtii
Cre09.g392000 5.0kb downstream 5.0kb downstream 20632 true chromosome_9: 2355931-2376562 Chlamydomonas reinhardtii
Cre09.g392000 5.0kb downstream 5.0kb downstream 5000 false chromosome_9: 2371563-2376562 Chlamydomonas reinhardtii
Cre09.g392000 10.0kb upstream 10.0kb upstream 25632 true chromosome_9: 2345931-2371562 Chlamydomonas reinhardtii
Cre09.g392000 10.0kb upstream 10.0kb upstream 10000 false chromosome_9: 2345931-2355930 Chlamydomonas reinhardtii
Cre09.g392000 10.0kb downstream 10.0kb downstream 25632 true chromosome_9: 2355931-2381562 Chlamydomonas reinhardtii
Cre09.g392000 10.0kb downstream 10.0kb downstream 10000 false chromosome_9: 2371563-2381562 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124098002 5260 Chlorophyte View MSA
123428518 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.114       Low
cufflinks 0.261        
cufflinks 0.319        
cufflinks 0.414        
cufflinks 0.177        
cufflinks 0.244        
cufflinks 0.327        
cufflinks 0.37        
cufflinks 0.113       Low
cufflinks 0.084       Low
cufflinks 0.372        
cufflinks 0.364        
cufflinks 0.103     Low Low
cufflinks 0.239        
cufflinks 0.303        
cufflinks 0.195        
cufflinks 0.356        
cufflinks 0.302        
cufflinks 0.094       Low
cufflinks 0.941       High
cufflinks 0.259        
cufflinks 0.292        
cufflinks 0.694       High
cufflinks 0.339        
cufflinks 0.332        
cufflinks 2.04473 0.0 4.34311    
cufflinks 2.15299 0.297686 4.0083    
cufflinks 0.823143 0.0 2.23386    
cufflinks 1.95968 0.0 3.96234    
cufflinks 3.92991 0.297349 7.56247   High

0 Strain