Gene : VTE4 C. reinhardtii v5.6
Primary Identifier:  ? Cre09.g393400 Defline:  (1 of 1) 2.1.1.95 - Tocopherol O-methyltransferase
Genomic Order:  325 Name:  ? Cre09.g393400
Secondary Identifier:  ? PAC:30781444
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-1422 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7436 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre09.g393400 0.5kb upstream 0.5kb upstream 6145 true chromosome_9: 2145641-2151785 Chlamydomonas reinhardtii
Cre09.g393400 0.5kb upstream 0.5kb upstream 500 false chromosome_9: 2151286-2151785 Chlamydomonas reinhardtii
Cre09.g393400 0.5kb downstream 0.5kb downstream 6145 true chromosome_9: 2145141-2151285 Chlamydomonas reinhardtii
Cre09.g393400 0.5kb downstream 0.5kb downstream 500 false chromosome_9: 2145141-2145640 Chlamydomonas reinhardtii
Cre09.g393400 1.0kb upstream 1.0kb upstream 6645 true chromosome_9: 2145641-2152285 Chlamydomonas reinhardtii
Cre09.g393400 1.0kb upstream 1.0kb upstream 1000 false chromosome_9: 2151286-2152285 Chlamydomonas reinhardtii
Cre09.g393400 1.0kb downstream 1.0kb downstream 6645 true chromosome_9: 2144641-2151285 Chlamydomonas reinhardtii
Cre09.g393400 1.0kb downstream 1.0kb downstream 1000 false chromosome_9: 2144641-2145640 Chlamydomonas reinhardtii
Cre09.g393400 2.0kb upstream 2.0kb upstream 7645 true chromosome_9: 2145641-2153285 Chlamydomonas reinhardtii
Cre09.g393400 2.0kb upstream 2.0kb upstream 2000 false chromosome_9: 2151286-2153285 Chlamydomonas reinhardtii
Cre09.g393400 2.0kb downstream 2.0kb downstream 7645 true chromosome_9: 2143641-2151285 Chlamydomonas reinhardtii
Cre09.g393400 2.0kb downstream 2.0kb downstream 2000 false chromosome_9: 2143641-2145640 Chlamydomonas reinhardtii
Cre09.g393400 5.0kb upstream 5.0kb upstream 10645 true chromosome_9: 2145641-2156285 Chlamydomonas reinhardtii
Cre09.g393400 5.0kb upstream 5.0kb upstream 5000 false chromosome_9: 2151286-2156285 Chlamydomonas reinhardtii
Cre09.g393400 5.0kb downstream 5.0kb downstream 10645 true chromosome_9: 2140641-2151285 Chlamydomonas reinhardtii
Cre09.g393400 5.0kb downstream 5.0kb downstream 5000 false chromosome_9: 2140641-2145640 Chlamydomonas reinhardtii
Cre09.g393400 10.0kb upstream 10.0kb upstream 15645 true chromosome_9: 2145641-2161285 Chlamydomonas reinhardtii
Cre09.g393400 10.0kb upstream 10.0kb upstream 10000 false chromosome_9: 2151286-2161285 Chlamydomonas reinhardtii
Cre09.g393400 10.0kb downstream 10.0kb downstream 15645 true chromosome_9: 2135641-2151285 Chlamydomonas reinhardtii
Cre09.g393400 10.0kb downstream 10.0kb downstream 10000 false chromosome_9: 2135641-2145640 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109232 5260 Chlorophyte View MSA
123427925 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.151        
cufflinks 5.953        
cufflinks 8.508        
cufflinks 7.919        
cufflinks 8.164        
cufflinks 9.66        
cufflinks 7.307        
cufflinks 9.336        
cufflinks 4.84        
cufflinks 3.606       Low
cufflinks 6.139        
cufflinks 8.213        
cufflinks 9.339        
cufflinks 8.76        
cufflinks 6.81        
cufflinks 7.509        
cufflinks 7.173        
cufflinks 7.681        
cufflinks 1.533       Low
cufflinks 5.058        
cufflinks 7.155        
cufflinks 6.563        
cufflinks 5.646        
cufflinks 8.335        
cufflinks 6.82        
cufflinks 11.3097 1.53118 21.0882    
cufflinks 17.8302 4.86982 30.7906    
cufflinks 30.9105 0.0 62.6808 High High
cufflinks 11.2547 1.51064 20.9988    
cufflinks 19.5122 3.4829 35.5415   High

0 Strain