Gene : Cre09.g394917 C. reinhardtii v5.6
Defline:  (1 of 4) PTHR16255:SF4 - SPORULATION PROTEIN RMD8 Genomic Order:  689
Name:  ? Cre09.g394917 Secondary Identifier:  ? PAC:30780615
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre09.g394917 0.5kb upstream 0.5kb upstream 5205 true chromosome_9: 4327466-4332670 Chlamydomonas reinhardtii
Cre09.g394917 0.5kb upstream 0.5kb upstream 500 false chromosome_9: 4332171-4332670 Chlamydomonas reinhardtii
Cre09.g394917 0.5kb downstream 0.5kb downstream 5205 true chromosome_9: 4326966-4332170 Chlamydomonas reinhardtii
Cre09.g394917 0.5kb downstream 0.5kb downstream 500 false chromosome_9: 4326966-4327465 Chlamydomonas reinhardtii
Cre09.g394917 1.0kb upstream 1.0kb upstream 5705 true chromosome_9: 4327466-4333170 Chlamydomonas reinhardtii
Cre09.g394917 1.0kb upstream 1.0kb upstream 1000 false chromosome_9: 4332171-4333170 Chlamydomonas reinhardtii
Cre09.g394917 1.0kb downstream 1.0kb downstream 5705 true chromosome_9: 4326466-4332170 Chlamydomonas reinhardtii
Cre09.g394917 1.0kb downstream 1.0kb downstream 1000 false chromosome_9: 4326466-4327465 Chlamydomonas reinhardtii
Cre09.g394917 2.0kb upstream 2.0kb upstream 6705 true chromosome_9: 4327466-4334170 Chlamydomonas reinhardtii
Cre09.g394917 2.0kb upstream 2.0kb upstream 2000 false chromosome_9: 4332171-4334170 Chlamydomonas reinhardtii
Cre09.g394917 2.0kb downstream 2.0kb downstream 6705 true chromosome_9: 4325466-4332170 Chlamydomonas reinhardtii
Cre09.g394917 2.0kb downstream 2.0kb downstream 2000 false chromosome_9: 4325466-4327465 Chlamydomonas reinhardtii
Cre09.g394917 5.0kb upstream 5.0kb upstream 9705 true chromosome_9: 4327466-4337170 Chlamydomonas reinhardtii
Cre09.g394917 5.0kb upstream 5.0kb upstream 5000 false chromosome_9: 4332171-4337170 Chlamydomonas reinhardtii
Cre09.g394917 5.0kb downstream 5.0kb downstream 9705 true chromosome_9: 4322466-4332170 Chlamydomonas reinhardtii
Cre09.g394917 5.0kb downstream 5.0kb downstream 5000 false chromosome_9: 4322466-4327465 Chlamydomonas reinhardtii
Cre09.g394917 10.0kb upstream 10.0kb upstream 14705 true chromosome_9: 4327466-4342170 Chlamydomonas reinhardtii
Cre09.g394917 10.0kb upstream 10.0kb upstream 10000 false chromosome_9: 4332171-4342170 Chlamydomonas reinhardtii
Cre09.g394917 10.0kb downstream 10.0kb downstream 14705 true chromosome_9: 4317466-4332170 Chlamydomonas reinhardtii
Cre09.g394917 10.0kb downstream 10.0kb downstream 10000 false chromosome_9: 4317466-4327465 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112843 5260 Chlorophyte View MSA
123425933 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.265        
cufflinks 4.918       Low
cufflinks 9.892        
cufflinks 12.885        
cufflinks 7.488        
cufflinks 6.708        
cufflinks 7.945        
cufflinks 13.242       High
cufflinks 4.191       Low
cufflinks 2.713       Low
cufflinks 11.517        
cufflinks 9.58        
cufflinks 7.397        
cufflinks 6.976        
cufflinks 9.054        
cufflinks 6.388        
cufflinks 14.567     High High
cufflinks 8.371        
cufflinks 2.261       Low
cufflinks 11.956        
cufflinks 8.331        
cufflinks 11.613     High  
cufflinks 7.468        
cufflinks 13.992       High
cufflinks 13.242     High High
cufflinks 4.02929 0.674992 7.38358   Low
cufflinks 5.11505 1.22065 9.00945    
cufflinks 25.2721 0.0 51.4427   High
cufflinks 8.1299 1.08628 15.1735    
cufflinks 11.1545 2.19284 20.1162    

0 Strain