Gene : Cre09.g394399 C. reinhardtii v5.6
Defline:  (1 of 1) K14767 - U3 small nucleolar RNA-associated protein 3 (UTP3, SAS10) Genomic Order:  675
Name:  ? Cre09.g394399 Secondary Identifier:  ? PAC:30780529
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre09.g394399 0.5kb upstream 0.5kb upstream 7497 true chromosome_9: 4228584-4236080 Chlamydomonas reinhardtii
Cre09.g394399 0.5kb upstream 0.5kb upstream 500 false chromosome_9: 4235581-4236080 Chlamydomonas reinhardtii
Cre09.g394399 0.5kb downstream 0.5kb downstream 7497 true chromosome_9: 4228084-4235580 Chlamydomonas reinhardtii
Cre09.g394399 0.5kb downstream 0.5kb downstream 500 false chromosome_9: 4228084-4228583 Chlamydomonas reinhardtii
Cre09.g394399 1.0kb upstream 1.0kb upstream 7997 true chromosome_9: 4228584-4236580 Chlamydomonas reinhardtii
Cre09.g394399 1.0kb upstream 1.0kb upstream 1000 false chromosome_9: 4235581-4236580 Chlamydomonas reinhardtii
Cre09.g394399 1.0kb downstream 1.0kb downstream 7997 true chromosome_9: 4227584-4235580 Chlamydomonas reinhardtii
Cre09.g394399 1.0kb downstream 1.0kb downstream 1000 false chromosome_9: 4227584-4228583 Chlamydomonas reinhardtii
Cre09.g394399 2.0kb upstream 2.0kb upstream 8997 true chromosome_9: 4228584-4237580 Chlamydomonas reinhardtii
Cre09.g394399 2.0kb upstream 2.0kb upstream 2000 false chromosome_9: 4235581-4237580 Chlamydomonas reinhardtii
Cre09.g394399 2.0kb downstream 2.0kb downstream 8997 true chromosome_9: 4226584-4235580 Chlamydomonas reinhardtii
Cre09.g394399 2.0kb downstream 2.0kb downstream 2000 false chromosome_9: 4226584-4228583 Chlamydomonas reinhardtii
Cre09.g394399 5.0kb upstream 5.0kb upstream 11997 true chromosome_9: 4228584-4240580 Chlamydomonas reinhardtii
Cre09.g394399 5.0kb upstream 5.0kb upstream 5000 false chromosome_9: 4235581-4240580 Chlamydomonas reinhardtii
Cre09.g394399 5.0kb downstream 5.0kb downstream 11997 true chromosome_9: 4223584-4235580 Chlamydomonas reinhardtii
Cre09.g394399 5.0kb downstream 5.0kb downstream 5000 false chromosome_9: 4223584-4228583 Chlamydomonas reinhardtii
Cre09.g394399 10.0kb upstream 10.0kb upstream 16997 true chromosome_9: 4228584-4245580 Chlamydomonas reinhardtii
Cre09.g394399 10.0kb upstream 10.0kb upstream 10000 false chromosome_9: 4235581-4245580 Chlamydomonas reinhardtii
Cre09.g394399 10.0kb downstream 10.0kb downstream 16997 true chromosome_9: 4218584-4235580 Chlamydomonas reinhardtii
Cre09.g394399 10.0kb downstream 10.0kb downstream 10000 false chromosome_9: 4218584-4228583 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109414 5260 Chlorophyte View MSA
123424280 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.928        
cufflinks 5.612        
cufflinks 3.414        
cufflinks 4.805        
cufflinks 3.862        
cufflinks 4.303        
cufflinks 4.726        
cufflinks 4.169        
cufflinks 2.599        
cufflinks 1.281       Low
cufflinks 5.708        
cufflinks 5.191        
cufflinks 1.715        
cufflinks 4.413        
cufflinks 3.525        
cufflinks 4.495        
cufflinks 0.467       Low
cufflinks 3.389        
cufflinks 1.506        
cufflinks 4.487        
cufflinks 4.094        
cufflinks 0.838       Low
cufflinks 4.857        
cufflinks 4.032        
cufflinks 0.541       Low
cufflinks 47.1881 0.0 96.4115 High High
cufflinks 44.579 9.29662 79.8614 High High
cufflinks 1.43635 0.0 3.24125   Low
cufflinks 18.3899 0.558001 36.2218   Low
cufflinks 54.8281 2.96046 106.696 High High

0 Strain