Gene : Cre09.g413450 C. reinhardtii v5.6
Defline:  (1 of 47) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) Genomic Order:  1112
Name:  ? Cre09.g413450 Secondary Identifier:  ? PAC:30780188
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre09.g413450 0.5kb upstream 0.5kb upstream 5056 true chromosome_9: 7432966-7438021 Chlamydomonas reinhardtii
Cre09.g413450 0.5kb upstream 0.5kb upstream 500 false chromosome_9: 7432966-7433465 Chlamydomonas reinhardtii
Cre09.g413450 0.5kb downstream 0.5kb downstream 5056 true chromosome_9: 7433466-7438521 Chlamydomonas reinhardtii
Cre09.g413450 0.5kb downstream 0.5kb downstream 500 false chromosome_9: 7438022-7438521 Chlamydomonas reinhardtii
Cre09.g413450 1.0kb upstream 1.0kb upstream 5556 true chromosome_9: 7432466-7438021 Chlamydomonas reinhardtii
Cre09.g413450 1.0kb upstream 1.0kb upstream 1000 false chromosome_9: 7432466-7433465 Chlamydomonas reinhardtii
Cre09.g413450 1.0kb downstream 1.0kb downstream 5556 true chromosome_9: 7433466-7439021 Chlamydomonas reinhardtii
Cre09.g413450 1.0kb downstream 1.0kb downstream 1000 false chromosome_9: 7438022-7439021 Chlamydomonas reinhardtii
Cre09.g413450 2.0kb upstream 2.0kb upstream 6556 true chromosome_9: 7431466-7438021 Chlamydomonas reinhardtii
Cre09.g413450 2.0kb upstream 2.0kb upstream 2000 false chromosome_9: 7431466-7433465 Chlamydomonas reinhardtii
Cre09.g413450 2.0kb downstream 2.0kb downstream 6556 true chromosome_9: 7433466-7440021 Chlamydomonas reinhardtii
Cre09.g413450 2.0kb downstream 2.0kb downstream 2000 false chromosome_9: 7438022-7440021 Chlamydomonas reinhardtii
Cre09.g413450 5.0kb upstream 5.0kb upstream 9556 true chromosome_9: 7428466-7438021 Chlamydomonas reinhardtii
Cre09.g413450 5.0kb upstream 5.0kb upstream 5000 false chromosome_9: 7428466-7433465 Chlamydomonas reinhardtii
Cre09.g413450 5.0kb downstream 5.0kb downstream 9556 true chromosome_9: 7433466-7443021 Chlamydomonas reinhardtii
Cre09.g413450 5.0kb downstream 5.0kb downstream 5000 false chromosome_9: 7438022-7443021 Chlamydomonas reinhardtii
Cre09.g413450 10.0kb upstream 10.0kb upstream 14556 true chromosome_9: 7423466-7438021 Chlamydomonas reinhardtii
Cre09.g413450 10.0kb upstream 10.0kb upstream 10000 false chromosome_9: 7423466-7433465 Chlamydomonas reinhardtii
Cre09.g413450 10.0kb downstream 10.0kb downstream 14556 true chromosome_9: 7433466-7448021 Chlamydomonas reinhardtii
Cre09.g413450 10.0kb downstream 10.0kb downstream 10000 false chromosome_9: 7438022-7448021 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124078139 5260 Chlorophyte Singleton cluster - no MSA
123396091 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.636       Low
cufflinks 1.553        
cufflinks 1.862        
cufflinks 2.409       High
cufflinks 1.417        
cufflinks 1.812        
cufflinks 2.715       High
cufflinks 2.816       High
cufflinks 0.815        
cufflinks 0.543       Low
cufflinks 2.45       High
cufflinks 1.739        
cufflinks 0.889        
cufflinks 1.551        
cufflinks 1.358        
cufflinks 0.768       Low
cufflinks 0.765       Low
cufflinks 1.624        
cufflinks 0.797        
cufflinks 2.157        
cufflinks 1.548        
cufflinks 0.642       Low
cufflinks 1.703        
cufflinks 2.411       High
cufflinks 0.583       Low
cufflinks 0.740462 0.0 1.48301   Low
cufflinks 4.8413 1.1982 8.48441    
cufflinks 1.51186 0.0 3.3751    
cufflinks 3.07489 0.513174 5.63661    
cufflinks 4.30462 0.826723 7.78251    

0 Strain