Gene : CCT2 C. reinhardtii v5.6
Primary Identifier:  ? Cre09.g416750 Defline:  (1 of 1) K09494 - T-complex protein 1 subunit beta (CCT2)
Genomic Order:  1183 Name:  ? Cre09.g416750
Secondary Identifier:  ? PAC:30781340
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre09.g416750 0.5kb upstream 0.5kb upstream 5462 true chromosome_9: 7844392-7849853 Chlamydomonas reinhardtii
Cre09.g416750 0.5kb upstream 0.5kb upstream 500 false chromosome_9: 7844392-7844891 Chlamydomonas reinhardtii
Cre09.g416750 0.5kb downstream 0.5kb downstream 5462 true chromosome_9: 7844892-7850353 Chlamydomonas reinhardtii
Cre09.g416750 0.5kb downstream 0.5kb downstream 500 false chromosome_9: 7849854-7850353 Chlamydomonas reinhardtii
Cre09.g416750 1.0kb upstream 1.0kb upstream 5962 true chromosome_9: 7843892-7849853 Chlamydomonas reinhardtii
Cre09.g416750 1.0kb upstream 1.0kb upstream 1000 false chromosome_9: 7843892-7844891 Chlamydomonas reinhardtii
Cre09.g416750 1.0kb downstream 1.0kb downstream 5962 true chromosome_9: 7844892-7850853 Chlamydomonas reinhardtii
Cre09.g416750 1.0kb downstream 1.0kb downstream 1000 false chromosome_9: 7849854-7850853 Chlamydomonas reinhardtii
Cre09.g416750 2.0kb upstream 2.0kb upstream 6962 true chromosome_9: 7842892-7849853 Chlamydomonas reinhardtii
Cre09.g416750 2.0kb upstream 2.0kb upstream 2000 false chromosome_9: 7842892-7844891 Chlamydomonas reinhardtii
Cre09.g416750 2.0kb downstream 2.0kb downstream 6962 true chromosome_9: 7844892-7851853 Chlamydomonas reinhardtii
Cre09.g416750 2.0kb downstream 2.0kb downstream 2000 false chromosome_9: 7849854-7851853 Chlamydomonas reinhardtii
Cre09.g416750 5.0kb upstream 5.0kb upstream 9962 true chromosome_9: 7839892-7849853 Chlamydomonas reinhardtii
Cre09.g416750 5.0kb upstream 5.0kb upstream 5000 false chromosome_9: 7839892-7844891 Chlamydomonas reinhardtii
Cre09.g416750 5.0kb downstream 5.0kb downstream 9962 true chromosome_9: 7844892-7854853 Chlamydomonas reinhardtii
Cre09.g416750 5.0kb downstream 5.0kb downstream 5000 false chromosome_9: 7849854-7854853 Chlamydomonas reinhardtii
Cre09.g416750 10.0kb upstream 10.0kb upstream 14962 true chromosome_9: 7834892-7849853 Chlamydomonas reinhardtii
Cre09.g416750 10.0kb upstream 10.0kb upstream 10000 false chromosome_9: 7834892-7844891 Chlamydomonas reinhardtii
Cre09.g416750 10.0kb downstream 10.0kb downstream 14962 true chromosome_9: 7844892-7859853 Chlamydomonas reinhardtii
Cre09.g416750 10.0kb downstream 10.0kb downstream 10000 false chromosome_9: 7849854-7859853 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108683 5260 Chlorophyte View MSA
123426772 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.85     High  
cufflinks 27.846     High  
cufflinks 30.682     High High
cufflinks 21.207     High  
cufflinks 24.236     High  
cufflinks 21.81     High  
cufflinks 32.266     High High
cufflinks 26.856     High  
cufflinks 12.422     High  
cufflinks 15.218     High  
cufflinks 19.598     High  
cufflinks 18.651     High  
cufflinks 21.216     High  
cufflinks 23.34     High  
cufflinks 14.062     High  
cufflinks 13.829     High  
cufflinks 3.892       Low
cufflinks 22.68     High  
cufflinks 6.789     High Low
cufflinks 12.074        
cufflinks 13.775     High  
cufflinks 4.756       Low
cufflinks 17.096     High  
cufflinks 20.713     High  
cufflinks 4.377       Low
cufflinks 40.119 0.0 81.235 High Low
cufflinks 19.3845 5.09974 33.6693    
cufflinks 20.3127 0.0 41.1761   Low
cufflinks 23.2089 0.498174 45.9197 High Low
cufflinks 28.2279 3.71946 52.7364   High

0 Strain