Gene : FAP351 C. reinhardtii v5.6
Primary Identifier:  ? Cre09.g415650 Defline:  (1 of 6) PF07004 - Sperm-tail PG-rich repeat (SHIPPO-rpt)
Genomic Order:  1159 Name:  ? Cre09.g415650
Secondary Identifier:  ? PAC:30781049
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre09.g415650 0.5kb upstream 0.5kb upstream 5936 true chromosome_9: 7696532-7702467 Chlamydomonas reinhardtii
Cre09.g415650 0.5kb upstream 0.5kb upstream 500 false chromosome_9: 7701968-7702467 Chlamydomonas reinhardtii
Cre09.g415650 0.5kb downstream 0.5kb downstream 5936 true chromosome_9: 7696032-7701967 Chlamydomonas reinhardtii
Cre09.g415650 0.5kb downstream 0.5kb downstream 500 false chromosome_9: 7696032-7696531 Chlamydomonas reinhardtii
Cre09.g415650 1.0kb upstream 1.0kb upstream 6436 true chromosome_9: 7696532-7702967 Chlamydomonas reinhardtii
Cre09.g415650 1.0kb upstream 1.0kb upstream 1000 false chromosome_9: 7701968-7702967 Chlamydomonas reinhardtii
Cre09.g415650 1.0kb downstream 1.0kb downstream 6436 true chromosome_9: 7695532-7701967 Chlamydomonas reinhardtii
Cre09.g415650 1.0kb downstream 1.0kb downstream 1000 false chromosome_9: 7695532-7696531 Chlamydomonas reinhardtii
Cre09.g415650 2.0kb upstream 2.0kb upstream 7436 true chromosome_9: 7696532-7703967 Chlamydomonas reinhardtii
Cre09.g415650 2.0kb upstream 2.0kb upstream 2000 false chromosome_9: 7701968-7703967 Chlamydomonas reinhardtii
Cre09.g415650 2.0kb downstream 2.0kb downstream 7436 true chromosome_9: 7694532-7701967 Chlamydomonas reinhardtii
Cre09.g415650 2.0kb downstream 2.0kb downstream 2000 false chromosome_9: 7694532-7696531 Chlamydomonas reinhardtii
Cre09.g415650 5.0kb upstream 5.0kb upstream 10436 true chromosome_9: 7696532-7706967 Chlamydomonas reinhardtii
Cre09.g415650 5.0kb upstream 5.0kb upstream 5000 false chromosome_9: 7701968-7706967 Chlamydomonas reinhardtii
Cre09.g415650 5.0kb downstream 5.0kb downstream 10436 true chromosome_9: 7691532-7701967 Chlamydomonas reinhardtii
Cre09.g415650 5.0kb downstream 5.0kb downstream 5000 false chromosome_9: 7691532-7696531 Chlamydomonas reinhardtii
Cre09.g415650 10.0kb upstream 10.0kb upstream 15436 true chromosome_9: 7696532-7711967 Chlamydomonas reinhardtii
Cre09.g415650 10.0kb upstream 10.0kb upstream 10000 false chromosome_9: 7701968-7711967 Chlamydomonas reinhardtii
Cre09.g415650 10.0kb downstream 10.0kb downstream 15436 true chromosome_9: 7686532-7701967 Chlamydomonas reinhardtii
Cre09.g415650 10.0kb downstream 10.0kb downstream 10000 false chromosome_9: 7686532-7696531 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108678 5260 Chlorophyte View MSA
123422848 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.521        
cufflinks 1.767        
cufflinks 7.703       High
cufflinks 10.531       High
cufflinks 1.44        
cufflinks 1.446        
cufflinks 1.464        
cufflinks 3.413        
cufflinks 2.012        
cufflinks 0.624       Low
cufflinks 17.875     High High
cufflinks 3.028        
cufflinks 1.429        
cufflinks 1.442        
cufflinks 6.839       High
cufflinks 0.846       Low
cufflinks 1.45        
cufflinks 3.995        
cufflinks 0.476       Low
cufflinks 1.481        
cufflinks 5.865       High
cufflinks 1.296        
cufflinks 1.634        
cufflinks 6.159       High
cufflinks 1.34        
cufflinks 3.95042 0.656177 7.24467   Low
cufflinks 6.71205 0.760386 12.6637    
cufflinks 10.9051 0.0 21.9137    
cufflinks 5.44629 0.903886 9.9887    
cufflinks 5.16478 0.805716 9.52384    

0 Strain