Gene : AHD1 C. reinhardtii v5.6
Primary Identifier:  ? Cre18.g749447 Defline:  (1 of 2) K12524 - bifunctional aspartokinase / homoserine dehydrogenase 1 (thrA)
Genomic Order:  28 Name:  ? Cre18.g749447
Secondary Identifier:  ? PAC:30783852
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii HOMOSERSYN-PWY Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-3001 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-5097 Chlamydomonas reinhardtii pathologic  
Creinhardtii THRESYN-PWY Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre18.g749447 0.5kb upstream 0.5kb upstream 8941 true scaffold_18: 172890-181830 Chlamydomonas reinhardtii
Cre18.g749447 0.5kb upstream 0.5kb upstream 500 false scaffold_18: 181331-181830 Chlamydomonas reinhardtii
Cre18.g749447 0.5kb downstream 0.5kb downstream 8941 true scaffold_18: 172390-181330 Chlamydomonas reinhardtii
Cre18.g749447 0.5kb downstream 0.5kb downstream 500 false scaffold_18: 172390-172889 Chlamydomonas reinhardtii
Cre18.g749447 1.0kb upstream 1.0kb upstream 9441 true scaffold_18: 172890-182330 Chlamydomonas reinhardtii
Cre18.g749447 1.0kb upstream 1.0kb upstream 1000 false scaffold_18: 181331-182330 Chlamydomonas reinhardtii
Cre18.g749447 1.0kb downstream 1.0kb downstream 9441 true scaffold_18: 171890-181330 Chlamydomonas reinhardtii
Cre18.g749447 1.0kb downstream 1.0kb downstream 1000 false scaffold_18: 171890-172889 Chlamydomonas reinhardtii
Cre18.g749447 2.0kb upstream 2.0kb upstream 10441 true scaffold_18: 172890-183330 Chlamydomonas reinhardtii
Cre18.g749447 2.0kb upstream 2.0kb upstream 2000 false scaffold_18: 181331-183330 Chlamydomonas reinhardtii
Cre18.g749447 2.0kb downstream 2.0kb downstream 10441 true scaffold_18: 170890-181330 Chlamydomonas reinhardtii
Cre18.g749447 2.0kb downstream 2.0kb downstream 2000 false scaffold_18: 170890-172889 Chlamydomonas reinhardtii
Cre18.g749447 5.0kb upstream 5.0kb upstream 13441 true scaffold_18: 172890-186330 Chlamydomonas reinhardtii
Cre18.g749447 5.0kb upstream 5.0kb upstream 5000 false scaffold_18: 181331-186330 Chlamydomonas reinhardtii
Cre18.g749447 5.0kb downstream 5.0kb downstream 13441 true scaffold_18: 167890-181330 Chlamydomonas reinhardtii
Cre18.g749447 5.0kb downstream 5.0kb downstream 5000 false scaffold_18: 167890-172889 Chlamydomonas reinhardtii
Cre18.g749447 10.0kb upstream 10.0kb upstream 18441 true scaffold_18: 172890-191330 Chlamydomonas reinhardtii
Cre18.g749447 10.0kb upstream 10.0kb upstream 10000 false scaffold_18: 181331-191330 Chlamydomonas reinhardtii
Cre18.g749447 10.0kb downstream 10.0kb downstream 18441 true scaffold_18: 162890-181330 Chlamydomonas reinhardtii
Cre18.g749447 10.0kb downstream 10.0kb downstream 10000 false scaffold_18: 162890-172889 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108795 5260 Chlorophyte View MSA
123423775 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.438        
cufflinks 11.073       High
cufflinks 7.156        
cufflinks 8.151        
cufflinks 10.376        
cufflinks 8.601        
cufflinks 6.71        
cufflinks 8.427        
cufflinks 9.867        
cufflinks 2.359       Low
cufflinks 9.271        
cufflinks 8.684        
cufflinks 3.565       Low
cufflinks 9.454        
cufflinks 6.123        
cufflinks 11.041       High
cufflinks 6.311        
cufflinks 7.647        
cufflinks 1.371       Low
cufflinks 4.946        
cufflinks 7.745        
cufflinks 5.806        
cufflinks 5.47        
cufflinks 8.665        
cufflinks 6.399        
cufflinks 61.3377 0.0 137.529 High Low
cufflinks 78.8423 9.74307 147.942 High  
cufflinks 13.0938 0.0 26.7493   Low
cufflinks 43.7684 0.0 97.6882 High Low
cufflinks 59.5609 0.0 123.24 High High

0 Strain