Gene : CAT1 C. reinhardtii v5.6
Primary Identifier:  ? Cre09.g417150 Defline:  (1 of 1) 1.11.1.6 - Catalase
Genomic Order:  1195 Name:  ? Cre09.g417150
Secondary Identifier:  ? PAC:30780452
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii DETOX1-PWY Chlamydomonas reinhardtii pathologic  
Creinhardtii DETOX1-PWY-1 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre09.g417150 0.5kb upstream 0.5kb upstream 5194 true chromosome_9: 7906271-7911464 Chlamydomonas reinhardtii
Cre09.g417150 0.5kb upstream 0.5kb upstream 500 false chromosome_9: 7906271-7906770 Chlamydomonas reinhardtii
Cre09.g417150 0.5kb downstream 0.5kb downstream 5194 true chromosome_9: 7906771-7911964 Chlamydomonas reinhardtii
Cre09.g417150 0.5kb downstream 0.5kb downstream 500 false chromosome_9: 7911465-7911964 Chlamydomonas reinhardtii
Cre09.g417150 1.0kb upstream 1.0kb upstream 5694 true chromosome_9: 7905771-7911464 Chlamydomonas reinhardtii
Cre09.g417150 1.0kb upstream 1.0kb upstream 1000 false chromosome_9: 7905771-7906770 Chlamydomonas reinhardtii
Cre09.g417150 1.0kb downstream 1.0kb downstream 5694 true chromosome_9: 7906771-7912464 Chlamydomonas reinhardtii
Cre09.g417150 1.0kb downstream 1.0kb downstream 1000 false chromosome_9: 7911465-7912464 Chlamydomonas reinhardtii
Cre09.g417150 2.0kb upstream 2.0kb upstream 6694 true chromosome_9: 7904771-7911464 Chlamydomonas reinhardtii
Cre09.g417150 2.0kb upstream 2.0kb upstream 2000 false chromosome_9: 7904771-7906770 Chlamydomonas reinhardtii
Cre09.g417150 2.0kb downstream 2.0kb downstream 6694 true chromosome_9: 7906771-7913464 Chlamydomonas reinhardtii
Cre09.g417150 2.0kb downstream 2.0kb downstream 2000 false chromosome_9: 7911465-7913464 Chlamydomonas reinhardtii
Cre09.g417150 5.0kb upstream 5.0kb upstream 9694 true chromosome_9: 7901771-7911464 Chlamydomonas reinhardtii
Cre09.g417150 5.0kb upstream 5.0kb upstream 5000 false chromosome_9: 7901771-7906770 Chlamydomonas reinhardtii
Cre09.g417150 5.0kb downstream 5.0kb downstream 9694 true chromosome_9: 7906771-7916464 Chlamydomonas reinhardtii
Cre09.g417150 5.0kb downstream 5.0kb downstream 5000 false chromosome_9: 7911465-7916464 Chlamydomonas reinhardtii
Cre09.g417150 10.0kb upstream 10.0kb upstream 14694 true chromosome_9: 7896771-7911464 Chlamydomonas reinhardtii
Cre09.g417150 10.0kb upstream 10.0kb upstream 10000 false chromosome_9: 7896771-7906770 Chlamydomonas reinhardtii
Cre09.g417150 10.0kb downstream 10.0kb downstream 14694 true chromosome_9: 7906771-7921464 Chlamydomonas reinhardtii
Cre09.g417150 10.0kb downstream 10.0kb downstream 10000 false chromosome_9: 7911465-7921464 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124097935 5260 Chlorophyte View MSA
123424047 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.632     High  
cufflinks 57.663     High High
cufflinks 82.876     High High
cufflinks 40.698     High  
cufflinks 60.389     High High
cufflinks 42.201     High  
cufflinks 47.135     High  
cufflinks 22.947     High  
cufflinks 28.255     High  
cufflinks 29.618     High  
cufflinks 79.816     High High
cufflinks 26.356     High  
cufflinks 28.377     High  
cufflinks 54.527     High  
cufflinks 29.41     High  
cufflinks 23.757     High  
cufflinks 28.162     High  
cufflinks 56.703     High High
cufflinks 8.063     High Low
cufflinks 49.473     High  
cufflinks 23.245     High  
cufflinks 24.605     High  
cufflinks 22.955     High  
cufflinks 42.155     High  
cufflinks 24.526     High  
cufflinks 116.429 0.0 238.911 High Low
cufflinks 167.125 28.5877 305.663 High  
cufflinks 75.1812 0.0 155.916 High  
cufflinks 132.083 0.0 270.97 High  
cufflinks 136.047 2.22558 269.868 High  

0 Strain