Gene : Cre09.g417025 C. reinhardtii v5.6
Genomic Order:  1190 Name:  ? Cre09.g417025
Secondary Identifier:  ? PAC:30781294
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre09.g417025 0.5kb upstream 0.5kb upstream 2032 true chromosome_9: 7891476-7893507 Chlamydomonas reinhardtii
Cre09.g417025 0.5kb upstream 0.5kb upstream 500 false chromosome_9: 7891476-7891975 Chlamydomonas reinhardtii
Cre09.g417025 0.5kb downstream 0.5kb downstream 2032 true chromosome_9: 7891976-7894007 Chlamydomonas reinhardtii
Cre09.g417025 0.5kb downstream 0.5kb downstream 500 false chromosome_9: 7893508-7894007 Chlamydomonas reinhardtii
Cre09.g417025 1.0kb upstream 1.0kb upstream 2532 true chromosome_9: 7890976-7893507 Chlamydomonas reinhardtii
Cre09.g417025 1.0kb upstream 1.0kb upstream 1000 false chromosome_9: 7890976-7891975 Chlamydomonas reinhardtii
Cre09.g417025 1.0kb downstream 1.0kb downstream 2532 true chromosome_9: 7891976-7894507 Chlamydomonas reinhardtii
Cre09.g417025 1.0kb downstream 1.0kb downstream 1000 false chromosome_9: 7893508-7894507 Chlamydomonas reinhardtii
Cre09.g417025 2.0kb upstream 2.0kb upstream 3532 true chromosome_9: 7889976-7893507 Chlamydomonas reinhardtii
Cre09.g417025 2.0kb upstream 2.0kb upstream 2000 false chromosome_9: 7889976-7891975 Chlamydomonas reinhardtii
Cre09.g417025 2.0kb downstream 2.0kb downstream 3532 true chromosome_9: 7891976-7895507 Chlamydomonas reinhardtii
Cre09.g417025 2.0kb downstream 2.0kb downstream 2000 false chromosome_9: 7893508-7895507 Chlamydomonas reinhardtii
Cre09.g417025 5.0kb upstream 5.0kb upstream 6532 true chromosome_9: 7886976-7893507 Chlamydomonas reinhardtii
Cre09.g417025 5.0kb upstream 5.0kb upstream 5000 false chromosome_9: 7886976-7891975 Chlamydomonas reinhardtii
Cre09.g417025 5.0kb downstream 5.0kb downstream 6532 true chromosome_9: 7891976-7898507 Chlamydomonas reinhardtii
Cre09.g417025 5.0kb downstream 5.0kb downstream 5000 false chromosome_9: 7893508-7898507 Chlamydomonas reinhardtii
Cre09.g417025 10.0kb upstream 10.0kb upstream 11532 true chromosome_9: 7881976-7893507 Chlamydomonas reinhardtii
Cre09.g417025 10.0kb upstream 10.0kb upstream 10000 false chromosome_9: 7881976-7891975 Chlamydomonas reinhardtii
Cre09.g417025 10.0kb downstream 10.0kb downstream 11532 true chromosome_9: 7891976-7903507 Chlamydomonas reinhardtii
Cre09.g417025 10.0kb downstream 10.0kb downstream 10000 false chromosome_9: 7893508-7903507 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124078500 5260 Chlorophyte Singleton cluster - no MSA
123396421 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.13     Low  
cufflinks 0.232        
cufflinks 0.211        
cufflinks 0.144     Low  
cufflinks 0.248        
cufflinks 0.276       High
cufflinks 0.307       High
cufflinks 0.036     Low Low
cufflinks 0.089        
cufflinks 0.051     Low Low
cufflinks 0.147     Low  
cufflinks 0.204        
cufflinks 0.153        
cufflinks 0.086     Low  
cufflinks 0.119     Low  
cufflinks 0.307       High
cufflinks 0.243        
cufflinks 0.098        
cufflinks 0.327       High
cufflinks 0.083     Low  
cufflinks 0.041     Low Low
cufflinks 0.149     Low  
cufflinks 0.273        
cufflinks 0.154        
cufflinks 0.153097 0.0 0.387094 Low  
cufflinks 0.0184602 0.0 0.146436 Low  
cufflinks 0.178907 0.0 0.678541 Low  
cufflinks 0.160595 0.0 0.401396 Low  
cufflinks 0.430551 0.0 1.09116 Low  

0 Strain