Gene : Cre09.g401701 C. reinhardtii v5.6
Defline:  (1 of 4) PF06966 - Protein of unknown function (DUF1295) (DUF1295) Genomic Order:  872
Name:  ? Cre09.g401701 Secondary Identifier:  ? PAC:30780378
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre09.g401701 0.5kb upstream 0.5kb upstream 5585 true chromosome_9: 5721697-5727281 Chlamydomonas reinhardtii
Cre09.g401701 0.5kb upstream 0.5kb upstream 500 false chromosome_9: 5721697-5722196 Chlamydomonas reinhardtii
Cre09.g401701 0.5kb downstream 0.5kb downstream 5585 true chromosome_9: 5722197-5727781 Chlamydomonas reinhardtii
Cre09.g401701 0.5kb downstream 0.5kb downstream 500 false chromosome_9: 5727282-5727781 Chlamydomonas reinhardtii
Cre09.g401701 1.0kb upstream 1.0kb upstream 6085 true chromosome_9: 5721197-5727281 Chlamydomonas reinhardtii
Cre09.g401701 1.0kb upstream 1.0kb upstream 1000 false chromosome_9: 5721197-5722196 Chlamydomonas reinhardtii
Cre09.g401701 1.0kb downstream 1.0kb downstream 6085 true chromosome_9: 5722197-5728281 Chlamydomonas reinhardtii
Cre09.g401701 1.0kb downstream 1.0kb downstream 1000 false chromosome_9: 5727282-5728281 Chlamydomonas reinhardtii
Cre09.g401701 2.0kb upstream 2.0kb upstream 7085 true chromosome_9: 5720197-5727281 Chlamydomonas reinhardtii
Cre09.g401701 2.0kb upstream 2.0kb upstream 2000 false chromosome_9: 5720197-5722196 Chlamydomonas reinhardtii
Cre09.g401701 2.0kb downstream 2.0kb downstream 7085 true chromosome_9: 5722197-5729281 Chlamydomonas reinhardtii
Cre09.g401701 2.0kb downstream 2.0kb downstream 2000 false chromosome_9: 5727282-5729281 Chlamydomonas reinhardtii
Cre09.g401701 5.0kb upstream 5.0kb upstream 10085 true chromosome_9: 5717197-5727281 Chlamydomonas reinhardtii
Cre09.g401701 5.0kb upstream 5.0kb upstream 5000 false chromosome_9: 5717197-5722196 Chlamydomonas reinhardtii
Cre09.g401701 5.0kb downstream 5.0kb downstream 10085 true chromosome_9: 5722197-5732281 Chlamydomonas reinhardtii
Cre09.g401701 5.0kb downstream 5.0kb downstream 5000 false chromosome_9: 5727282-5732281 Chlamydomonas reinhardtii
Cre09.g401701 10.0kb upstream 10.0kb upstream 15085 true chromosome_9: 5712197-5727281 Chlamydomonas reinhardtii
Cre09.g401701 10.0kb upstream 10.0kb upstream 10000 false chromosome_9: 5712197-5722196 Chlamydomonas reinhardtii
Cre09.g401701 10.0kb downstream 10.0kb downstream 15085 true chromosome_9: 5722197-5737281 Chlamydomonas reinhardtii
Cre09.g401701 10.0kb downstream 10.0kb downstream 10000 false chromosome_9: 5727282-5737281 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110217 5260 Chlorophyte View MSA
123429173 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.605        
cufflinks 6.19        
cufflinks 4.798        
cufflinks 8.48        
cufflinks 11.744       High
cufflinks 5.023        
cufflinks 5.317        
cufflinks 3.604       Low
cufflinks 8.379        
cufflinks 3.34       Low
cufflinks 9.22       High
cufflinks 5.618        
cufflinks 6.204        
cufflinks 5.229        
cufflinks 5.484        
cufflinks 5.598        
cufflinks 8.359        
cufflinks 7.738        
cufflinks 1.616       Low
cufflinks 4.298        
cufflinks 6.951        
cufflinks 8.954        
cufflinks 2.821       Low
cufflinks 8.58        
cufflinks 9.295       High
cufflinks 13.0574 1.62242 24.4924    
cufflinks 19.9843 5.4239 34.5448    
cufflinks 19.6757 0.0 39.5986   High
cufflinks 13.2452 1.60701 24.8833    
cufflinks 11.7218 2.34941 21.0942    

0 Strain