Gene : Cre09.g403182 C. reinhardtii v5.6
Defline:  (1 of 1) K11292 - transcription elongation factor SPT6 (SUPT6H, SPT6) Genomic Order:  912
Name:  ? Cre09.g403182 Secondary Identifier:  ? PAC:30781077
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre09.g403182 0.5kb upstream 0.5kb upstream 18626 true chromosome_9: 6053340-6071965 Chlamydomonas reinhardtii
Cre09.g403182 0.5kb upstream 0.5kb upstream 500 false chromosome_9: 6071466-6071965 Chlamydomonas reinhardtii
Cre09.g403182 0.5kb downstream 0.5kb downstream 18626 true chromosome_9: 6052840-6071465 Chlamydomonas reinhardtii
Cre09.g403182 0.5kb downstream 0.5kb downstream 500 false chromosome_9: 6052840-6053339 Chlamydomonas reinhardtii
Cre09.g403182 1.0kb upstream 1.0kb upstream 19126 true chromosome_9: 6053340-6072465 Chlamydomonas reinhardtii
Cre09.g403182 1.0kb upstream 1.0kb upstream 1000 false chromosome_9: 6071466-6072465 Chlamydomonas reinhardtii
Cre09.g403182 1.0kb downstream 1.0kb downstream 19126 true chromosome_9: 6052340-6071465 Chlamydomonas reinhardtii
Cre09.g403182 1.0kb downstream 1.0kb downstream 1000 false chromosome_9: 6052340-6053339 Chlamydomonas reinhardtii
Cre09.g403182 2.0kb upstream 2.0kb upstream 20126 true chromosome_9: 6053340-6073465 Chlamydomonas reinhardtii
Cre09.g403182 2.0kb upstream 2.0kb upstream 2000 false chromosome_9: 6071466-6073465 Chlamydomonas reinhardtii
Cre09.g403182 2.0kb downstream 2.0kb downstream 20126 true chromosome_9: 6051340-6071465 Chlamydomonas reinhardtii
Cre09.g403182 2.0kb downstream 2.0kb downstream 2000 false chromosome_9: 6051340-6053339 Chlamydomonas reinhardtii
Cre09.g403182 5.0kb upstream 5.0kb upstream 23126 true chromosome_9: 6053340-6076465 Chlamydomonas reinhardtii
Cre09.g403182 5.0kb upstream 5.0kb upstream 5000 false chromosome_9: 6071466-6076465 Chlamydomonas reinhardtii
Cre09.g403182 5.0kb downstream 5.0kb downstream 23126 true chromosome_9: 6048340-6071465 Chlamydomonas reinhardtii
Cre09.g403182 5.0kb downstream 5.0kb downstream 5000 false chromosome_9: 6048340-6053339 Chlamydomonas reinhardtii
Cre09.g403182 10.0kb upstream 10.0kb upstream 28126 true chromosome_9: 6053340-6081465 Chlamydomonas reinhardtii
Cre09.g403182 10.0kb upstream 10.0kb upstream 10000 false chromosome_9: 6071466-6081465 Chlamydomonas reinhardtii
Cre09.g403182 10.0kb downstream 10.0kb downstream 28126 true chromosome_9: 6043340-6071465 Chlamydomonas reinhardtii
Cre09.g403182 10.0kb downstream 10.0kb downstream 10000 false chromosome_9: 6043340-6053339 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113531 5260 Chlorophyte View MSA
123426736 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.526       Low
cufflinks 1.732       High
cufflinks 1.161        
cufflinks 1.55        
cufflinks 1.202        
cufflinks 0.962        
cufflinks 1.37        
cufflinks 1.564        
cufflinks 0.892        
cufflinks 0.227       Low
cufflinks 1.384        
cufflinks 1.484        
cufflinks 0.298       Low
cufflinks 1.187        
cufflinks 1.069        
cufflinks 0.936        
cufflinks 1.057        
cufflinks 1.24        
cufflinks 0.197       Low
cufflinks 1.182        
cufflinks 1.259        
cufflinks 0.835        
cufflinks 1.218        
cufflinks 1.26        
cufflinks 0.976        
cufflinks 12.8867 0.0195267 25.7539   Low
cufflinks 11.3343 2.90201 19.7665   High
cufflinks 4.53624 0.0 9.11711    
cufflinks 6.29131 0.501311 12.0813   Low
cufflinks 11.2795 1.51279 21.0462   High

0 Strain