Gene : Cre09.g402650 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR21236:SF2 - PROTEIN F32D8.14, ISOFORM A Genomic Order:  117
Name:  ? Cre09.g402650 Secondary Identifier:  ? PAC:30780912
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre09.g402650 0.5kb upstream 0.5kb upstream 3444 true chromosome_9: 713278-716721 Chlamydomonas reinhardtii
Cre09.g402650 0.5kb upstream 0.5kb upstream 500 false chromosome_9: 713278-713777 Chlamydomonas reinhardtii
Cre09.g402650 0.5kb downstream 0.5kb downstream 3444 true chromosome_9: 713778-717221 Chlamydomonas reinhardtii
Cre09.g402650 0.5kb downstream 0.5kb downstream 500 false chromosome_9: 716722-717221 Chlamydomonas reinhardtii
Cre09.g402650 1.0kb upstream 1.0kb upstream 3944 true chromosome_9: 712778-716721 Chlamydomonas reinhardtii
Cre09.g402650 1.0kb upstream 1.0kb upstream 1000 false chromosome_9: 712778-713777 Chlamydomonas reinhardtii
Cre09.g402650 1.0kb downstream 1.0kb downstream 3944 true chromosome_9: 713778-717721 Chlamydomonas reinhardtii
Cre09.g402650 1.0kb downstream 1.0kb downstream 1000 false chromosome_9: 716722-717721 Chlamydomonas reinhardtii
Cre09.g402650 2.0kb upstream 2.0kb upstream 4944 true chromosome_9: 711778-716721 Chlamydomonas reinhardtii
Cre09.g402650 2.0kb upstream 2.0kb upstream 2000 false chromosome_9: 711778-713777 Chlamydomonas reinhardtii
Cre09.g402650 2.0kb downstream 2.0kb downstream 4944 true chromosome_9: 713778-718721 Chlamydomonas reinhardtii
Cre09.g402650 2.0kb downstream 2.0kb downstream 2000 false chromosome_9: 716722-718721 Chlamydomonas reinhardtii
Cre09.g402650 5.0kb upstream 5.0kb upstream 7944 true chromosome_9: 708778-716721 Chlamydomonas reinhardtii
Cre09.g402650 5.0kb upstream 5.0kb upstream 5000 false chromosome_9: 708778-713777 Chlamydomonas reinhardtii
Cre09.g402650 5.0kb downstream 5.0kb downstream 7944 true chromosome_9: 713778-721721 Chlamydomonas reinhardtii
Cre09.g402650 5.0kb downstream 5.0kb downstream 5000 false chromosome_9: 716722-721721 Chlamydomonas reinhardtii
Cre09.g402650 10.0kb upstream 10.0kb upstream 12944 true chromosome_9: 703778-716721 Chlamydomonas reinhardtii
Cre09.g402650 10.0kb upstream 10.0kb upstream 10000 false chromosome_9: 703778-713777 Chlamydomonas reinhardtii
Cre09.g402650 10.0kb downstream 10.0kb downstream 12944 true chromosome_9: 713778-726721 Chlamydomonas reinhardtii
Cre09.g402650 10.0kb downstream 10.0kb downstream 10000 false chromosome_9: 716722-726721 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110863 5260 Chlorophyte View MSA
123427417 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.043        
cufflinks 7.3        
cufflinks 8.487       High
cufflinks 6.771        
cufflinks 6.723        
cufflinks 6.345        
cufflinks 8.472       High
cufflinks 9.095       High
cufflinks 3.659       Low
cufflinks 4.208        
cufflinks 4.585        
cufflinks 6.819        
cufflinks 7.143        
cufflinks 6.883        
cufflinks 5.332        
cufflinks 3.817       Low
cufflinks 3.551       Low
cufflinks 5.907        
cufflinks 4.532        
cufflinks 6.441        
cufflinks 6.084        
cufflinks 3.021       Low
cufflinks 7.652        
cufflinks 6.366        
cufflinks 2.763       Low
cufflinks 12.6978 2.04178 23.3538    
cufflinks 6.72217 0.96707 12.4773    
cufflinks 11.297 0.0 22.9857    
cufflinks 6.37747 0.963836 11.7911    
cufflinks 6.29479 0.760797 11.8288    

0 Strain