Gene : ATPVD2 C. reinhardtii v5.6
Primary Identifier:  ? Cre09.g405050 Defline:  (1 of 1) K02149 - V-type H+-transporting ATPase subunit D (ATPeV1D, ATP6M)
Genomic Order:  64 Name:  ? Cre09.g405050
Secondary Identifier:  ? PAC:30780969
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre09.g405050 0.5kb upstream 0.5kb upstream 3126 true chromosome_9: 363974-367099 Chlamydomonas reinhardtii
Cre09.g405050 0.5kb upstream 0.5kb upstream 500 false chromosome_9: 366600-367099 Chlamydomonas reinhardtii
Cre09.g405050 0.5kb downstream 0.5kb downstream 3126 true chromosome_9: 363474-366599 Chlamydomonas reinhardtii
Cre09.g405050 0.5kb downstream 0.5kb downstream 500 false chromosome_9: 363474-363973 Chlamydomonas reinhardtii
Cre09.g405050 1.0kb upstream 1.0kb upstream 3626 true chromosome_9: 363974-367599 Chlamydomonas reinhardtii
Cre09.g405050 1.0kb upstream 1.0kb upstream 1000 false chromosome_9: 366600-367599 Chlamydomonas reinhardtii
Cre09.g405050 1.0kb downstream 1.0kb downstream 3626 true chromosome_9: 362974-366599 Chlamydomonas reinhardtii
Cre09.g405050 1.0kb downstream 1.0kb downstream 1000 false chromosome_9: 362974-363973 Chlamydomonas reinhardtii
Cre09.g405050 2.0kb upstream 2.0kb upstream 4626 true chromosome_9: 363974-368599 Chlamydomonas reinhardtii
Cre09.g405050 2.0kb upstream 2.0kb upstream 2000 false chromosome_9: 366600-368599 Chlamydomonas reinhardtii
Cre09.g405050 2.0kb downstream 2.0kb downstream 4626 true chromosome_9: 361974-366599 Chlamydomonas reinhardtii
Cre09.g405050 2.0kb downstream 2.0kb downstream 2000 false chromosome_9: 361974-363973 Chlamydomonas reinhardtii
Cre09.g405050 5.0kb upstream 5.0kb upstream 7626 true chromosome_9: 363974-371599 Chlamydomonas reinhardtii
Cre09.g405050 5.0kb upstream 5.0kb upstream 5000 false chromosome_9: 366600-371599 Chlamydomonas reinhardtii
Cre09.g405050 5.0kb downstream 5.0kb downstream 7626 true chromosome_9: 358974-366599 Chlamydomonas reinhardtii
Cre09.g405050 5.0kb downstream 5.0kb downstream 5000 false chromosome_9: 358974-363973 Chlamydomonas reinhardtii
Cre09.g405050 10.0kb upstream 10.0kb upstream 12626 true chromosome_9: 363974-376599 Chlamydomonas reinhardtii
Cre09.g405050 10.0kb upstream 10.0kb upstream 10000 false chromosome_9: 366600-376599 Chlamydomonas reinhardtii
Cre09.g405050 10.0kb downstream 10.0kb downstream 12626 true chromosome_9: 353974-366599 Chlamydomonas reinhardtii
Cre09.g405050 10.0kb downstream 10.0kb downstream 10000 false chromosome_9: 353974-363973 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110482 5260 Chlorophyte View MSA
123424080 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.034     High  
cufflinks 41.696     High High
cufflinks 27.696     High  
cufflinks 28.073     High  
cufflinks 39.358     High  
cufflinks 37.99     High  
cufflinks 26.698     High  
cufflinks 25.898     High  
cufflinks 29.669     High  
cufflinks 13.778     High Low
cufflinks 19.036     High  
cufflinks 28.721     High  
cufflinks 20.847     High  
cufflinks 42.329     High High
cufflinks 23.771     High  
cufflinks 37.484     High  
cufflinks 26.856     High  
cufflinks 33.474     High  
cufflinks 3.402       Low
cufflinks 18.875     High  
cufflinks 23.407     High  
cufflinks 26.009     High  
cufflinks 28.172     High  
cufflinks 22.188     High  
cufflinks 25.046     High  
cufflinks 79.5309 0.0 162.068 High Low
cufflinks 36.2966 9.25034 63.3428 High  
cufflinks 42.6671 0.0 87.1186 High  
cufflinks 27.8979 1.44187 54.354 High Low
cufflinks 53.6021 6.01901 101.185 High High

0 Strain