Gene : Cre50.g761447 C. reinhardtii v5.6
Defline:  (1 of 1) K03500 - 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] (rsmB, sun) Genomic Order:  2
Name:  ? Cre50.g761447 Secondary Identifier:  ? PAC:30778303
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre50.g761447 0.5kb upstream 0.5kb upstream 6672 true scaffold_50: 1086-7757 Chlamydomonas reinhardtii
Cre50.g761447 0.5kb upstream 0.5kb upstream 500 false scaffold_50: 1086-1585 Chlamydomonas reinhardtii
Cre50.g761447 0.5kb downstream 0.5kb downstream 6672 true scaffold_50: 1586-8257 Chlamydomonas reinhardtii
Cre50.g761447 0.5kb downstream 0.5kb downstream 500 false scaffold_50: 7758-8257 Chlamydomonas reinhardtii
Cre50.g761447 1.0kb upstream 1.0kb upstream 7172 true scaffold_50: 586-7757 Chlamydomonas reinhardtii
Cre50.g761447 1.0kb upstream 1.0kb upstream 1000 false scaffold_50: 586-1585 Chlamydomonas reinhardtii
Cre50.g761447 1.0kb downstream 1.0kb downstream 7172 true scaffold_50: 1586-8757 Chlamydomonas reinhardtii
Cre50.g761447 1.0kb downstream 1.0kb downstream 1000 false scaffold_50: 7758-8757 Chlamydomonas reinhardtii
Cre50.g761447 2.0kb upstream 2.0kb upstream 7757 true scaffold_50: 1-7757 Chlamydomonas reinhardtii
Cre50.g761447 2.0kb upstream 2.0kb upstream 1585 false scaffold_50: 1-1585 Chlamydomonas reinhardtii
Cre50.g761447 2.0kb downstream 2.0kb downstream 8172 true scaffold_50: 1586-9757 Chlamydomonas reinhardtii
Cre50.g761447 2.0kb downstream 2.0kb downstream 2000 false scaffold_50: 7758-9757 Chlamydomonas reinhardtii
Cre50.g761447 5.0kb upstream 5.0kb upstream 7757 true scaffold_50: 1-7757 Chlamydomonas reinhardtii
Cre50.g761447 5.0kb upstream 5.0kb upstream 1585 false scaffold_50: 1-1585 Chlamydomonas reinhardtii
Cre50.g761447 5.0kb downstream 5.0kb downstream 11142 true scaffold_50: 1586-12727 Chlamydomonas reinhardtii
Cre50.g761447 5.0kb downstream 5.0kb downstream 4970 false scaffold_50: 7758-12727 Chlamydomonas reinhardtii
Cre50.g761447 10.0kb upstream 10.0kb upstream 7757 true scaffold_50: 1-7757 Chlamydomonas reinhardtii
Cre50.g761447 10.0kb upstream 10.0kb upstream 1585 false scaffold_50: 1-1585 Chlamydomonas reinhardtii
Cre50.g761447 10.0kb downstream 10.0kb downstream 11142 true scaffold_50: 1586-12727 Chlamydomonas reinhardtii
Cre50.g761447 10.0kb downstream 10.0kb downstream 4970 false scaffold_50: 7758-12727 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112600 5260 Chlorophyte View MSA
123427921 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.402        
cufflinks 1.089        
cufflinks 0.533        
cufflinks 0.964        
cufflinks 0.808        
cufflinks 0.895        
cufflinks 0.942        
cufflinks 0.996        
cufflinks 0.53        
cufflinks 0.231       Low
cufflinks 1.15        
cufflinks 0.993        
cufflinks 0.48        
cufflinks 1.04        
cufflinks 0.759        
cufflinks 0.593        
cufflinks 0.16       Low
cufflinks 0.744        
cufflinks 0.481        
cufflinks 1.524       High
cufflinks 0.894        
cufflinks 0.161       Low
cufflinks 0.999        
cufflinks 1.022        
cufflinks 0.134       Low
cufflinks 5.1742 0.879157 9.46925   High
cufflinks 6.40126 1.5633 11.2392    
cufflinks 1.05901 0.0 2.65205    
cufflinks 4.0453 0.647699 7.44291    
cufflinks 5.46685 1.01375 9.91994    

0 Strain