Gene : Cucsa.159720 C. sativus v1.0
Defline:  (1 of 1) PTHR10742:SF284 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A Genomic Order:  14
Name:  ? Cucsa.159720 Secondary Identifier:  ? PAC:16965236
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-6441 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.159720 0.5kb upstream 0.5kb upstream 9995 true scaffold01144: 101897-111891 Cucumis sativus
Cucsa.159720 0.5kb upstream 0.5kb upstream 500 false scaffold01144: 111392-111891 Cucumis sativus
Cucsa.159720 0.5kb downstream 0.5kb downstream 9995 true scaffold01144: 101397-111391 Cucumis sativus
Cucsa.159720 0.5kb downstream 0.5kb downstream 500 false scaffold01144: 101397-101896 Cucumis sativus
Cucsa.159720 1.0kb upstream 1.0kb upstream 10495 true scaffold01144: 101897-112391 Cucumis sativus
Cucsa.159720 1.0kb upstream 1.0kb upstream 1000 false scaffold01144: 111392-112391 Cucumis sativus
Cucsa.159720 1.0kb downstream 1.0kb downstream 10495 true scaffold01144: 100897-111391 Cucumis sativus
Cucsa.159720 1.0kb downstream 1.0kb downstream 1000 false scaffold01144: 100897-101896 Cucumis sativus
Cucsa.159720 2.0kb upstream 2.0kb upstream 11495 true scaffold01144: 101897-113391 Cucumis sativus
Cucsa.159720 2.0kb upstream 2.0kb upstream 2000 false scaffold01144: 111392-113391 Cucumis sativus
Cucsa.159720 2.0kb downstream 2.0kb downstream 11495 true scaffold01144: 99897-111391 Cucumis sativus
Cucsa.159720 2.0kb downstream 2.0kb downstream 2000 false scaffold01144: 99897-101896 Cucumis sativus
Cucsa.159720 5.0kb upstream 5.0kb upstream 14495 true scaffold01144: 101897-116391 Cucumis sativus
Cucsa.159720 5.0kb upstream 5.0kb upstream 5000 false scaffold01144: 111392-116391 Cucumis sativus
Cucsa.159720 5.0kb downstream 5.0kb downstream 14495 true scaffold01144: 96897-111391 Cucumis sativus
Cucsa.159720 5.0kb downstream 5.0kb downstream 5000 false scaffold01144: 96897-101896 Cucumis sativus
Cucsa.159720 10.0kb upstream 10.0kb upstream 19495 true scaffold01144: 101897-121391 Cucumis sativus
Cucsa.159720 10.0kb upstream 10.0kb upstream 10000 false scaffold01144: 111392-121391 Cucumis sativus
Cucsa.159720 10.0kb downstream 10.0kb downstream 19495 true scaffold01144: 91897-111391 Cucumis sativus
Cucsa.159720 10.0kb downstream 10.0kb downstream 10000 false scaffold01144: 91897-101896 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312967 5265 Fabidae View MSA
124062670 5270 Rosid View MSA
123738203 5271 Pentapetalae View MSA
122790962 5272 Eudicot View MSA
122046463 5273 Angiosperm View MSA
121349079 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain