Gene : Cucsa.160890 C. sativus v1.0
Defline:  (1 of 2) PTHR13812//PTHR13812:SF20 - ORNITHINE CYCLODEAMINASE-RELATED Genomic Order:  129
Name:  ? Cucsa.160890 Secondary Identifier:  ? PAC:16965427
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-5188 Cucumis sativus pathologic  
Csativus PWY-5918 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.160890 0.5kb upstream 0.5kb upstream 3316 true scaffold01144: 969730-973045 Cucumis sativus
Cucsa.160890 0.5kb upstream 0.5kb upstream 500 false scaffold01144: 972546-973045 Cucumis sativus
Cucsa.160890 0.5kb downstream 0.5kb downstream 3316 true scaffold01144: 969230-972545 Cucumis sativus
Cucsa.160890 0.5kb downstream 0.5kb downstream 500 false scaffold01144: 969230-969729 Cucumis sativus
Cucsa.160890 1.0kb upstream 1.0kb upstream 3816 true scaffold01144: 969730-973545 Cucumis sativus
Cucsa.160890 1.0kb upstream 1.0kb upstream 1000 false scaffold01144: 972546-973545 Cucumis sativus
Cucsa.160890 1.0kb downstream 1.0kb downstream 3816 true scaffold01144: 968730-972545 Cucumis sativus
Cucsa.160890 1.0kb downstream 1.0kb downstream 1000 false scaffold01144: 968730-969729 Cucumis sativus
Cucsa.160890 2.0kb upstream 2.0kb upstream 4816 true scaffold01144: 969730-974545 Cucumis sativus
Cucsa.160890 2.0kb upstream 2.0kb upstream 2000 false scaffold01144: 972546-974545 Cucumis sativus
Cucsa.160890 2.0kb downstream 2.0kb downstream 4816 true scaffold01144: 967730-972545 Cucumis sativus
Cucsa.160890 2.0kb downstream 2.0kb downstream 2000 false scaffold01144: 967730-969729 Cucumis sativus
Cucsa.160890 5.0kb upstream 5.0kb upstream 7816 true scaffold01144: 969730-977545 Cucumis sativus
Cucsa.160890 5.0kb upstream 5.0kb upstream 5000 false scaffold01144: 972546-977545 Cucumis sativus
Cucsa.160890 5.0kb downstream 5.0kb downstream 7816 true scaffold01144: 964730-972545 Cucumis sativus
Cucsa.160890 5.0kb downstream 5.0kb downstream 5000 false scaffold01144: 964730-969729 Cucumis sativus
Cucsa.160890 10.0kb upstream 10.0kb upstream 12816 true scaffold01144: 969730-982545 Cucumis sativus
Cucsa.160890 10.0kb upstream 10.0kb upstream 10000 false scaffold01144: 972546-982545 Cucumis sativus
Cucsa.160890 10.0kb downstream 10.0kb downstream 12816 true scaffold01144: 959730-972545 Cucumis sativus
Cucsa.160890 10.0kb downstream 10.0kb downstream 10000 false scaffold01144: 959730-969729 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308158 5265 Fabidae View MSA
124065838 5270 Rosid View MSA
123737748 5271 Pentapetalae View MSA
122790191 5272 Eudicot View MSA
122042343 5273 Angiosperm View MSA
121344593 5274 Embryophyte View MSA
123424931 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain