Gene : Cucsa.160860 C. sativus v1.0
Defline:  (1 of 112) PF00010 - Helix-loop-helix DNA-binding domain (HLH) Genomic Order:  126
Name:  ? Cucsa.160860 Secondary Identifier:  ? PAC:16965416
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.160860 0.5kb upstream 0.5kb upstream 8582 true scaffold01144: 929880-938461 Cucumis sativus
Cucsa.160860 0.5kb upstream 0.5kb upstream 500 false scaffold01144: 929880-930379 Cucumis sativus
Cucsa.160860 0.5kb downstream 0.5kb downstream 8582 true scaffold01144: 930380-938961 Cucumis sativus
Cucsa.160860 0.5kb downstream 0.5kb downstream 500 false scaffold01144: 938462-938961 Cucumis sativus
Cucsa.160860 1.0kb upstream 1.0kb upstream 9082 true scaffold01144: 929380-938461 Cucumis sativus
Cucsa.160860 1.0kb upstream 1.0kb upstream 1000 false scaffold01144: 929380-930379 Cucumis sativus
Cucsa.160860 1.0kb downstream 1.0kb downstream 9082 true scaffold01144: 930380-939461 Cucumis sativus
Cucsa.160860 1.0kb downstream 1.0kb downstream 1000 false scaffold01144: 938462-939461 Cucumis sativus
Cucsa.160860 2.0kb upstream 2.0kb upstream 10082 true scaffold01144: 928380-938461 Cucumis sativus
Cucsa.160860 2.0kb upstream 2.0kb upstream 2000 false scaffold01144: 928380-930379 Cucumis sativus
Cucsa.160860 2.0kb downstream 2.0kb downstream 10082 true scaffold01144: 930380-940461 Cucumis sativus
Cucsa.160860 2.0kb downstream 2.0kb downstream 2000 false scaffold01144: 938462-940461 Cucumis sativus
Cucsa.160860 5.0kb upstream 5.0kb upstream 13082 true scaffold01144: 925380-938461 Cucumis sativus
Cucsa.160860 5.0kb upstream 5.0kb upstream 5000 false scaffold01144: 925380-930379 Cucumis sativus
Cucsa.160860 5.0kb downstream 5.0kb downstream 13082 true scaffold01144: 930380-943461 Cucumis sativus
Cucsa.160860 5.0kb downstream 5.0kb downstream 5000 false scaffold01144: 938462-943461 Cucumis sativus
Cucsa.160860 10.0kb upstream 10.0kb upstream 18082 true scaffold01144: 920380-938461 Cucumis sativus
Cucsa.160860 10.0kb upstream 10.0kb upstream 10000 false scaffold01144: 920380-930379 Cucumis sativus
Cucsa.160860 10.0kb downstream 10.0kb downstream 18082 true scaffold01144: 930380-948461 Cucumis sativus
Cucsa.160860 10.0kb downstream 10.0kb downstream 10000 false scaffold01144: 938462-948461 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310483 5265 Fabidae View MSA
124070728 5270 Rosid View MSA
123747636 5271 Pentapetalae View MSA
122790182 5272 Eudicot View MSA
122048874 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain