Gene : Cucsa.161450 C. sativus v1.0
Defline:  (1 of 3) PTHR23023:SF37 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA2-RELATED Genomic Order:  178
Name:  ? Cucsa.161450 Secondary Identifier:  ? PAC:16965506
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWYDQC-4 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.161450 0.5kb upstream 0.5kb upstream 3325 true scaffold01144: 1353679-1357003 Cucumis sativus
Cucsa.161450 0.5kb upstream 0.5kb upstream 500 false scaffold01144: 1356504-1357003 Cucumis sativus
Cucsa.161450 0.5kb downstream 0.5kb downstream 3325 true scaffold01144: 1353179-1356503 Cucumis sativus
Cucsa.161450 0.5kb downstream 0.5kb downstream 500 false scaffold01144: 1353179-1353678 Cucumis sativus
Cucsa.161450 1.0kb upstream 1.0kb upstream 3825 true scaffold01144: 1353679-1357503 Cucumis sativus
Cucsa.161450 1.0kb upstream 1.0kb upstream 1000 false scaffold01144: 1356504-1357503 Cucumis sativus
Cucsa.161450 1.0kb downstream 1.0kb downstream 3825 true scaffold01144: 1352679-1356503 Cucumis sativus
Cucsa.161450 1.0kb downstream 1.0kb downstream 1000 false scaffold01144: 1352679-1353678 Cucumis sativus
Cucsa.161450 2.0kb upstream 2.0kb upstream 4825 true scaffold01144: 1353679-1358503 Cucumis sativus
Cucsa.161450 2.0kb upstream 2.0kb upstream 2000 false scaffold01144: 1356504-1358503 Cucumis sativus
Cucsa.161450 2.0kb downstream 2.0kb downstream 4825 true scaffold01144: 1351679-1356503 Cucumis sativus
Cucsa.161450 2.0kb downstream 2.0kb downstream 2000 false scaffold01144: 1351679-1353678 Cucumis sativus
Cucsa.161450 5.0kb upstream 5.0kb upstream 7825 true scaffold01144: 1353679-1361503 Cucumis sativus
Cucsa.161450 5.0kb upstream 5.0kb upstream 5000 false scaffold01144: 1356504-1361503 Cucumis sativus
Cucsa.161450 5.0kb downstream 5.0kb downstream 7825 true scaffold01144: 1348679-1356503 Cucumis sativus
Cucsa.161450 5.0kb downstream 5.0kb downstream 5000 false scaffold01144: 1348679-1353678 Cucumis sativus
Cucsa.161450 10.0kb upstream 10.0kb upstream 12825 true scaffold01144: 1353679-1366503 Cucumis sativus
Cucsa.161450 10.0kb upstream 10.0kb upstream 10000 false scaffold01144: 1356504-1366503 Cucumis sativus
Cucsa.161450 10.0kb downstream 10.0kb downstream 12825 true scaffold01144: 1343679-1356503 Cucumis sativus
Cucsa.161450 10.0kb downstream 10.0kb downstream 10000 false scaffold01144: 1343679-1353678 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311336 5265 Fabidae View MSA
124069370 5270 Rosid View MSA
123747095 5271 Pentapetalae View MSA
122790040 5272 Eudicot View MSA
122050610 5273 Angiosperm View MSA
121351632 5274 Embryophyte View MSA
123426700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain