Gene : Cucsa.161970 C. sativus v1.0
Defline:  (1 of 1) PTHR31407:SF7 - PSBP DOMAIN-CONTAINING PROTEIN 5, CHLOROPLASTIC Genomic Order:  229
Name:  ? Cucsa.161970 Secondary Identifier:  ? PAC:16965594
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PHOTOALL-PWY Cucumis sativus pathologic  
Csativus PWY-101 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.161970 0.5kb upstream 0.5kb upstream 3974 true scaffold01144: 1726554-1730527 Cucumis sativus
Cucsa.161970 0.5kb upstream 0.5kb upstream 500 false scaffold01144: 1730028-1730527 Cucumis sativus
Cucsa.161970 0.5kb downstream 0.5kb downstream 3974 true scaffold01144: 1726054-1730027 Cucumis sativus
Cucsa.161970 0.5kb downstream 0.5kb downstream 500 false scaffold01144: 1726054-1726553 Cucumis sativus
Cucsa.161970 1.0kb upstream 1.0kb upstream 4474 true scaffold01144: 1726554-1731027 Cucumis sativus
Cucsa.161970 1.0kb upstream 1.0kb upstream 1000 false scaffold01144: 1730028-1731027 Cucumis sativus
Cucsa.161970 1.0kb downstream 1.0kb downstream 4474 true scaffold01144: 1725554-1730027 Cucumis sativus
Cucsa.161970 1.0kb downstream 1.0kb downstream 1000 false scaffold01144: 1725554-1726553 Cucumis sativus
Cucsa.161970 2.0kb upstream 2.0kb upstream 5474 true scaffold01144: 1726554-1732027 Cucumis sativus
Cucsa.161970 2.0kb upstream 2.0kb upstream 2000 false scaffold01144: 1730028-1732027 Cucumis sativus
Cucsa.161970 2.0kb downstream 2.0kb downstream 5474 true scaffold01144: 1724554-1730027 Cucumis sativus
Cucsa.161970 2.0kb downstream 2.0kb downstream 2000 false scaffold01144: 1724554-1726553 Cucumis sativus
Cucsa.161970 5.0kb upstream 5.0kb upstream 8474 true scaffold01144: 1726554-1735027 Cucumis sativus
Cucsa.161970 5.0kb upstream 5.0kb upstream 5000 false scaffold01144: 1730028-1735027 Cucumis sativus
Cucsa.161970 5.0kb downstream 5.0kb downstream 8474 true scaffold01144: 1721554-1730027 Cucumis sativus
Cucsa.161970 5.0kb downstream 5.0kb downstream 5000 false scaffold01144: 1721554-1726553 Cucumis sativus
Cucsa.161970 10.0kb upstream 10.0kb upstream 13474 true scaffold01144: 1726554-1740027 Cucumis sativus
Cucsa.161970 10.0kb upstream 10.0kb upstream 10000 false scaffold01144: 1730028-1740027 Cucumis sativus
Cucsa.161970 10.0kb downstream 10.0kb downstream 13474 true scaffold01144: 1716554-1730027 Cucumis sativus
Cucsa.161970 10.0kb downstream 10.0kb downstream 10000 false scaffold01144: 1716554-1726553 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302325 5265 Fabidae View MSA
124062486 5270 Rosid View MSA
123736940 5271 Pentapetalae View MSA
122792817 5272 Eudicot View MSA
122045870 5273 Angiosperm View MSA
121347202 5274 Embryophyte View MSA
123425599 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain