Gene : Cucsa.162080 C. sativus v1.0
Defline:  (1 of 3) PTHR23023:SF37 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA2-RELATED Genomic Order:  240
Name:  ? Cucsa.162080 Secondary Identifier:  ? PAC:16965618
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWYDQC-4 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.162080 0.5kb upstream 0.5kb upstream 2508 true scaffold01144: 1809296-1811803 Cucumis sativus
Cucsa.162080 0.5kb upstream 0.5kb upstream 500 false scaffold01144: 1811304-1811803 Cucumis sativus
Cucsa.162080 0.5kb downstream 0.5kb downstream 2508 true scaffold01144: 1808796-1811303 Cucumis sativus
Cucsa.162080 0.5kb downstream 0.5kb downstream 500 false scaffold01144: 1808796-1809295 Cucumis sativus
Cucsa.162080 1.0kb upstream 1.0kb upstream 3008 true scaffold01144: 1809296-1812303 Cucumis sativus
Cucsa.162080 1.0kb upstream 1.0kb upstream 1000 false scaffold01144: 1811304-1812303 Cucumis sativus
Cucsa.162080 1.0kb downstream 1.0kb downstream 3008 true scaffold01144: 1808296-1811303 Cucumis sativus
Cucsa.162080 1.0kb downstream 1.0kb downstream 1000 false scaffold01144: 1808296-1809295 Cucumis sativus
Cucsa.162080 2.0kb upstream 2.0kb upstream 4008 true scaffold01144: 1809296-1813303 Cucumis sativus
Cucsa.162080 2.0kb upstream 2.0kb upstream 2000 false scaffold01144: 1811304-1813303 Cucumis sativus
Cucsa.162080 2.0kb downstream 2.0kb downstream 4008 true scaffold01144: 1807296-1811303 Cucumis sativus
Cucsa.162080 2.0kb downstream 2.0kb downstream 2000 false scaffold01144: 1807296-1809295 Cucumis sativus
Cucsa.162080 5.0kb upstream 5.0kb upstream 7008 true scaffold01144: 1809296-1816303 Cucumis sativus
Cucsa.162080 5.0kb upstream 5.0kb upstream 5000 false scaffold01144: 1811304-1816303 Cucumis sativus
Cucsa.162080 5.0kb downstream 5.0kb downstream 7008 true scaffold01144: 1804296-1811303 Cucumis sativus
Cucsa.162080 5.0kb downstream 5.0kb downstream 5000 false scaffold01144: 1804296-1809295 Cucumis sativus
Cucsa.162080 10.0kb upstream 10.0kb upstream 12008 true scaffold01144: 1809296-1821303 Cucumis sativus
Cucsa.162080 10.0kb upstream 10.0kb upstream 10000 false scaffold01144: 1811304-1821303 Cucumis sativus
Cucsa.162080 10.0kb downstream 10.0kb downstream 12008 true scaffold01144: 1799296-1811303 Cucumis sativus
Cucsa.162080 10.0kb downstream 10.0kb downstream 10000 false scaffold01144: 1799296-1809295 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310734 5265 Fabidae View MSA
124066807 5270 Rosid View MSA
123736759 5271 Pentapetalae View MSA
122792944 5272 Eudicot View MSA
122049474 5273 Angiosperm View MSA
121351632 5274 Embryophyte View MSA
123426700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain