Gene : Cucsa.162160 C. sativus v1.0
Defline:  (1 of 1) PTHR11624:SF64 - 1-D-DEOXYXYLULOSE 5-PHOSPHATE SYNTHASE-LIKE PROTEIN Genomic Order:  248
Name:  ? Cucsa.162160 Secondary Identifier:  ? PAC:16965628
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7560 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.162160 0.5kb upstream 0.5kb upstream 4990 true scaffold01144: 1866329-1871318 Cucumis sativus
Cucsa.162160 0.5kb upstream 0.5kb upstream 500 false scaffold01144: 1866329-1866828 Cucumis sativus
Cucsa.162160 0.5kb downstream 0.5kb downstream 4990 true scaffold01144: 1866829-1871818 Cucumis sativus
Cucsa.162160 0.5kb downstream 0.5kb downstream 500 false scaffold01144: 1871319-1871818 Cucumis sativus
Cucsa.162160 1.0kb upstream 1.0kb upstream 5490 true scaffold01144: 1865829-1871318 Cucumis sativus
Cucsa.162160 1.0kb upstream 1.0kb upstream 1000 false scaffold01144: 1865829-1866828 Cucumis sativus
Cucsa.162160 1.0kb downstream 1.0kb downstream 5490 true scaffold01144: 1866829-1872318 Cucumis sativus
Cucsa.162160 1.0kb downstream 1.0kb downstream 1000 false scaffold01144: 1871319-1872318 Cucumis sativus
Cucsa.162160 2.0kb upstream 2.0kb upstream 6490 true scaffold01144: 1864829-1871318 Cucumis sativus
Cucsa.162160 2.0kb upstream 2.0kb upstream 2000 false scaffold01144: 1864829-1866828 Cucumis sativus
Cucsa.162160 2.0kb downstream 2.0kb downstream 6490 true scaffold01144: 1866829-1873318 Cucumis sativus
Cucsa.162160 2.0kb downstream 2.0kb downstream 2000 false scaffold01144: 1871319-1873318 Cucumis sativus
Cucsa.162160 5.0kb upstream 5.0kb upstream 9490 true scaffold01144: 1861829-1871318 Cucumis sativus
Cucsa.162160 5.0kb upstream 5.0kb upstream 5000 false scaffold01144: 1861829-1866828 Cucumis sativus
Cucsa.162160 5.0kb downstream 5.0kb downstream 9490 true scaffold01144: 1866829-1876318 Cucumis sativus
Cucsa.162160 5.0kb downstream 5.0kb downstream 5000 false scaffold01144: 1871319-1876318 Cucumis sativus
Cucsa.162160 10.0kb upstream 10.0kb upstream 14490 true scaffold01144: 1856829-1871318 Cucumis sativus
Cucsa.162160 10.0kb upstream 10.0kb upstream 10000 false scaffold01144: 1856829-1866828 Cucumis sativus
Cucsa.162160 10.0kb downstream 10.0kb downstream 14490 true scaffold01144: 1866829-1881318 Cucumis sativus
Cucsa.162160 10.0kb downstream 10.0kb downstream 10000 false scaffold01144: 1871319-1881318 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308713 5265 Fabidae View MSA
124066019 5270 Rosid View MSA
123737503 5271 Pentapetalae View MSA
122791788 5272 Eudicot View MSA
122044949 5273 Angiosperm View MSA
121310367 5274 Embryophyte View MSA
123347869 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain