Gene : Cucsa.165120 C. sativus v1.0
Defline:  (1 of 1) PTHR21230//PTHR21230:SF32 - VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED Genomic Order:  55
Name:  ? Cucsa.165120 Secondary Identifier:  ? PAC:16965963
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.165120 0.5kb upstream 0.5kb upstream 3299 true scaffold01153: 476027-479325 Cucumis sativus
Cucsa.165120 0.5kb upstream 0.5kb upstream 500 false scaffold01153: 476027-476526 Cucumis sativus
Cucsa.165120 0.5kb downstream 0.5kb downstream 3299 true scaffold01153: 476527-479825 Cucumis sativus
Cucsa.165120 0.5kb downstream 0.5kb downstream 500 false scaffold01153: 479326-479825 Cucumis sativus
Cucsa.165120 1.0kb upstream 1.0kb upstream 3799 true scaffold01153: 475527-479325 Cucumis sativus
Cucsa.165120 1.0kb upstream 1.0kb upstream 1000 false scaffold01153: 475527-476526 Cucumis sativus
Cucsa.165120 1.0kb downstream 1.0kb downstream 3799 true scaffold01153: 476527-480325 Cucumis sativus
Cucsa.165120 1.0kb downstream 1.0kb downstream 1000 false scaffold01153: 479326-480325 Cucumis sativus
Cucsa.165120 2.0kb upstream 2.0kb upstream 4799 true scaffold01153: 474527-479325 Cucumis sativus
Cucsa.165120 2.0kb upstream 2.0kb upstream 2000 false scaffold01153: 474527-476526 Cucumis sativus
Cucsa.165120 2.0kb downstream 2.0kb downstream 4799 true scaffold01153: 476527-481325 Cucumis sativus
Cucsa.165120 2.0kb downstream 2.0kb downstream 2000 false scaffold01153: 479326-481325 Cucumis sativus
Cucsa.165120 5.0kb upstream 5.0kb upstream 7799 true scaffold01153: 471527-479325 Cucumis sativus
Cucsa.165120 5.0kb upstream 5.0kb upstream 5000 false scaffold01153: 471527-476526 Cucumis sativus
Cucsa.165120 5.0kb downstream 5.0kb downstream 7799 true scaffold01153: 476527-484325 Cucumis sativus
Cucsa.165120 5.0kb downstream 5.0kb downstream 5000 false scaffold01153: 479326-484325 Cucumis sativus
Cucsa.165120 10.0kb upstream 10.0kb upstream 12799 true scaffold01153: 466527-479325 Cucumis sativus
Cucsa.165120 10.0kb upstream 10.0kb upstream 10000 false scaffold01153: 466527-476526 Cucumis sativus
Cucsa.165120 10.0kb downstream 10.0kb downstream 12799 true scaffold01153: 476527-489325 Cucumis sativus
Cucsa.165120 10.0kb downstream 10.0kb downstream 10000 false scaffold01153: 479326-489325 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300139 5265 Fabidae View MSA
124061213 5270 Rosid View MSA
123741301 5271 Pentapetalae View MSA
122797628 5272 Eudicot View MSA
122045061 5273 Angiosperm View MSA
121345053 5274 Embryophyte View MSA
123428626 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain