Gene : Cucsa.165450 C. sativus v1.0
Defline:  (1 of 14) PF16135 - TPL-binding domain in jasmonate signalling (Jas) Genomic Order:  88
Name:  ? Cucsa.165450 Secondary Identifier:  ? PAC:16966023
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.165450 0.5kb upstream 0.5kb upstream 7036 true scaffold01153: 812178-819213 Cucumis sativus
Cucsa.165450 0.5kb upstream 0.5kb upstream 500 false scaffold01153: 818714-819213 Cucumis sativus
Cucsa.165450 0.5kb downstream 0.5kb downstream 7036 true scaffold01153: 811678-818713 Cucumis sativus
Cucsa.165450 0.5kb downstream 0.5kb downstream 500 false scaffold01153: 811678-812177 Cucumis sativus
Cucsa.165450 1.0kb upstream 1.0kb upstream 7536 true scaffold01153: 812178-819713 Cucumis sativus
Cucsa.165450 1.0kb upstream 1.0kb upstream 1000 false scaffold01153: 818714-819713 Cucumis sativus
Cucsa.165450 1.0kb downstream 1.0kb downstream 7536 true scaffold01153: 811178-818713 Cucumis sativus
Cucsa.165450 1.0kb downstream 1.0kb downstream 1000 false scaffold01153: 811178-812177 Cucumis sativus
Cucsa.165450 2.0kb upstream 2.0kb upstream 8536 true scaffold01153: 812178-820713 Cucumis sativus
Cucsa.165450 2.0kb upstream 2.0kb upstream 2000 false scaffold01153: 818714-820713 Cucumis sativus
Cucsa.165450 2.0kb downstream 2.0kb downstream 8536 true scaffold01153: 810178-818713 Cucumis sativus
Cucsa.165450 2.0kb downstream 2.0kb downstream 2000 false scaffold01153: 810178-812177 Cucumis sativus
Cucsa.165450 5.0kb upstream 5.0kb upstream 11536 true scaffold01153: 812178-823713 Cucumis sativus
Cucsa.165450 5.0kb upstream 5.0kb upstream 5000 false scaffold01153: 818714-823713 Cucumis sativus
Cucsa.165450 5.0kb downstream 5.0kb downstream 11536 true scaffold01153: 807178-818713 Cucumis sativus
Cucsa.165450 5.0kb downstream 5.0kb downstream 5000 false scaffold01153: 807178-812177 Cucumis sativus
Cucsa.165450 10.0kb upstream 10.0kb upstream 16536 true scaffold01153: 812178-828713 Cucumis sativus
Cucsa.165450 10.0kb upstream 10.0kb upstream 10000 false scaffold01153: 818714-828713 Cucumis sativus
Cucsa.165450 10.0kb downstream 10.0kb downstream 16536 true scaffold01153: 802178-818713 Cucumis sativus
Cucsa.165450 10.0kb downstream 10.0kb downstream 10000 false scaffold01153: 802178-812177 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305570 5265 Fabidae View MSA
124072132 5270 Rosid View MSA
123747463 5271 Pentapetalae View MSA
122794643 5272 Eudicot View MSA
122051104 5273 Angiosperm View MSA
121312296 5274 Embryophyte View MSA
123349483 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain