Gene : Cucsa.166960 C. sativus v1.0
Defline:  (1 of 2) PTHR21256 - HISTIDINOL DEHYDROGENASE HDH Genomic Order:  24
Name:  ? Cucsa.166960 Secondary Identifier:  ? PAC:16966209
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus HISTSYN-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.166960 0.5kb upstream 0.5kb upstream 7843 true scaffold01154: 333722-341564 Cucumis sativus
Cucsa.166960 0.5kb upstream 0.5kb upstream 500 false scaffold01154: 341065-341564 Cucumis sativus
Cucsa.166960 0.5kb downstream 0.5kb downstream 7843 true scaffold01154: 333222-341064 Cucumis sativus
Cucsa.166960 0.5kb downstream 0.5kb downstream 500 false scaffold01154: 333222-333721 Cucumis sativus
Cucsa.166960 1.0kb upstream 1.0kb upstream 8343 true scaffold01154: 333722-342064 Cucumis sativus
Cucsa.166960 1.0kb upstream 1.0kb upstream 1000 false scaffold01154: 341065-342064 Cucumis sativus
Cucsa.166960 1.0kb downstream 1.0kb downstream 8343 true scaffold01154: 332722-341064 Cucumis sativus
Cucsa.166960 1.0kb downstream 1.0kb downstream 1000 false scaffold01154: 332722-333721 Cucumis sativus
Cucsa.166960 2.0kb upstream 2.0kb upstream 9343 true scaffold01154: 333722-343064 Cucumis sativus
Cucsa.166960 2.0kb upstream 2.0kb upstream 2000 false scaffold01154: 341065-343064 Cucumis sativus
Cucsa.166960 2.0kb downstream 2.0kb downstream 9343 true scaffold01154: 331722-341064 Cucumis sativus
Cucsa.166960 2.0kb downstream 2.0kb downstream 2000 false scaffold01154: 331722-333721 Cucumis sativus
Cucsa.166960 5.0kb upstream 5.0kb upstream 12343 true scaffold01154: 333722-346064 Cucumis sativus
Cucsa.166960 5.0kb upstream 5.0kb upstream 5000 false scaffold01154: 341065-346064 Cucumis sativus
Cucsa.166960 5.0kb downstream 5.0kb downstream 12343 true scaffold01154: 328722-341064 Cucumis sativus
Cucsa.166960 5.0kb downstream 5.0kb downstream 5000 false scaffold01154: 328722-333721 Cucumis sativus
Cucsa.166960 10.0kb upstream 10.0kb upstream 17343 true scaffold01154: 333722-351064 Cucumis sativus
Cucsa.166960 10.0kb upstream 10.0kb upstream 10000 false scaffold01154: 341065-351064 Cucumis sativus
Cucsa.166960 10.0kb downstream 10.0kb downstream 17343 true scaffold01154: 323722-341064 Cucumis sativus
Cucsa.166960 10.0kb downstream 10.0kb downstream 10000 false scaffold01154: 323722-333721 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312335 5265 Fabidae View MSA
124061664 5270 Rosid View MSA
123738837 5271 Pentapetalae View MSA
122785994 5272 Eudicot View MSA
122046994 5273 Angiosperm View MSA
121351553 5274 Embryophyte View MSA
123424167 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain