Gene : Cucsa.166920 C. sativus v1.0
Defline:  (1 of 21) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  21
Name:  ? Cucsa.166920 Secondary Identifier:  ? PAC:16966205
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.166920 0.5kb upstream 0.5kb upstream 3739 true scaffold01154: 306038-309776 Cucumis sativus
Cucsa.166920 0.5kb upstream 0.5kb upstream 500 false scaffold01154: 306038-306537 Cucumis sativus
Cucsa.166920 0.5kb downstream 0.5kb downstream 3739 true scaffold01154: 306538-310276 Cucumis sativus
Cucsa.166920 0.5kb downstream 0.5kb downstream 500 false scaffold01154: 309777-310276 Cucumis sativus
Cucsa.166920 1.0kb upstream 1.0kb upstream 4239 true scaffold01154: 305538-309776 Cucumis sativus
Cucsa.166920 1.0kb upstream 1.0kb upstream 1000 false scaffold01154: 305538-306537 Cucumis sativus
Cucsa.166920 1.0kb downstream 1.0kb downstream 4239 true scaffold01154: 306538-310776 Cucumis sativus
Cucsa.166920 1.0kb downstream 1.0kb downstream 1000 false scaffold01154: 309777-310776 Cucumis sativus
Cucsa.166920 2.0kb upstream 2.0kb upstream 5239 true scaffold01154: 304538-309776 Cucumis sativus
Cucsa.166920 2.0kb upstream 2.0kb upstream 2000 false scaffold01154: 304538-306537 Cucumis sativus
Cucsa.166920 2.0kb downstream 2.0kb downstream 5239 true scaffold01154: 306538-311776 Cucumis sativus
Cucsa.166920 2.0kb downstream 2.0kb downstream 2000 false scaffold01154: 309777-311776 Cucumis sativus
Cucsa.166920 5.0kb upstream 5.0kb upstream 8239 true scaffold01154: 301538-309776 Cucumis sativus
Cucsa.166920 5.0kb upstream 5.0kb upstream 5000 false scaffold01154: 301538-306537 Cucumis sativus
Cucsa.166920 5.0kb downstream 5.0kb downstream 8239 true scaffold01154: 306538-314776 Cucumis sativus
Cucsa.166920 5.0kb downstream 5.0kb downstream 5000 false scaffold01154: 309777-314776 Cucumis sativus
Cucsa.166920 10.0kb upstream 10.0kb upstream 13239 true scaffold01154: 296538-309776 Cucumis sativus
Cucsa.166920 10.0kb upstream 10.0kb upstream 10000 false scaffold01154: 296538-306537 Cucumis sativus
Cucsa.166920 10.0kb downstream 10.0kb downstream 13239 true scaffold01154: 306538-319776 Cucumis sativus
Cucsa.166920 10.0kb downstream 10.0kb downstream 10000 false scaffold01154: 309777-319776 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041217 5273 Angiosperm View MSA
122301081 5265 Fabidae View MSA
124067032 5270 Rosid View MSA
123740390 5271 Pentapetalae View MSA
122769977 5272 Eudicot View MSA
121309817 5274 Embryophyte View MSA
123347469 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain