Gene : Cucsa.179780 C. sativus v1.0
Defline:  (1 of 1) PTHR21043:SF1 - PROTEIN IOJAP, CHLOROPLASTIC Genomic Order:  14
Name:  ? Cucsa.179780 Secondary Identifier:  ? PAC:16967217
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.179780 0.5kb upstream 0.5kb upstream 4539 true scaffold01233: 155903-160441 Cucumis sativus
Cucsa.179780 0.5kb upstream 0.5kb upstream 500 false scaffold01233: 159942-160441 Cucumis sativus
Cucsa.179780 0.5kb downstream 0.5kb downstream 4539 true scaffold01233: 155403-159941 Cucumis sativus
Cucsa.179780 0.5kb downstream 0.5kb downstream 500 false scaffold01233: 155403-155902 Cucumis sativus
Cucsa.179780 1.0kb upstream 1.0kb upstream 5039 true scaffold01233: 155903-160941 Cucumis sativus
Cucsa.179780 1.0kb upstream 1.0kb upstream 1000 false scaffold01233: 159942-160941 Cucumis sativus
Cucsa.179780 1.0kb downstream 1.0kb downstream 5039 true scaffold01233: 154903-159941 Cucumis sativus
Cucsa.179780 1.0kb downstream 1.0kb downstream 1000 false scaffold01233: 154903-155902 Cucumis sativus
Cucsa.179780 2.0kb upstream 2.0kb upstream 6039 true scaffold01233: 155903-161941 Cucumis sativus
Cucsa.179780 2.0kb upstream 2.0kb upstream 2000 false scaffold01233: 159942-161941 Cucumis sativus
Cucsa.179780 2.0kb downstream 2.0kb downstream 6039 true scaffold01233: 153903-159941 Cucumis sativus
Cucsa.179780 2.0kb downstream 2.0kb downstream 2000 false scaffold01233: 153903-155902 Cucumis sativus
Cucsa.179780 5.0kb upstream 5.0kb upstream 9039 true scaffold01233: 155903-164941 Cucumis sativus
Cucsa.179780 5.0kb upstream 5.0kb upstream 5000 false scaffold01233: 159942-164941 Cucumis sativus
Cucsa.179780 5.0kb downstream 5.0kb downstream 9039 true scaffold01233: 150903-159941 Cucumis sativus
Cucsa.179780 5.0kb downstream 5.0kb downstream 5000 false scaffold01233: 150903-155902 Cucumis sativus
Cucsa.179780 10.0kb upstream 10.0kb upstream 14039 true scaffold01233: 155903-169941 Cucumis sativus
Cucsa.179780 10.0kb upstream 10.0kb upstream 10000 false scaffold01233: 159942-169941 Cucumis sativus
Cucsa.179780 10.0kb downstream 10.0kb downstream 14039 true scaffold01233: 145903-159941 Cucumis sativus
Cucsa.179780 10.0kb downstream 10.0kb downstream 10000 false scaffold01233: 145903-155902 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300008 5265 Fabidae View MSA
124067704 5270 Rosid View MSA
123743843 5271 Pentapetalae View MSA
122785584 5272 Eudicot View MSA
122043136 5273 Angiosperm View MSA
121343948 5274 Embryophyte View MSA
123426763 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain