Gene : Cucsa.179820 C. sativus v1.0
Defline:  (1 of 1) PTHR34369:SF2 - PHOTOSYSTEM II 10 KDA POLYPEPTIDE, CHLOROPLASTIC Genomic Order:  18
Name:  ? Cucsa.179820 Secondary Identifier:  ? PAC:16967224
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.179820 0.5kb upstream 0.5kb upstream 2391 true scaffold01233: 188330-190720 Cucumis sativus
Cucsa.179820 0.5kb upstream 0.5kb upstream 500 false scaffold01233: 188330-188829 Cucumis sativus
Cucsa.179820 0.5kb downstream 0.5kb downstream 2391 true scaffold01233: 188830-191220 Cucumis sativus
Cucsa.179820 0.5kb downstream 0.5kb downstream 500 false scaffold01233: 190721-191220 Cucumis sativus
Cucsa.179820 1.0kb upstream 1.0kb upstream 2891 true scaffold01233: 187830-190720 Cucumis sativus
Cucsa.179820 1.0kb upstream 1.0kb upstream 1000 false scaffold01233: 187830-188829 Cucumis sativus
Cucsa.179820 1.0kb downstream 1.0kb downstream 2891 true scaffold01233: 188830-191720 Cucumis sativus
Cucsa.179820 1.0kb downstream 1.0kb downstream 1000 false scaffold01233: 190721-191720 Cucumis sativus
Cucsa.179820 2.0kb upstream 2.0kb upstream 3891 true scaffold01233: 186830-190720 Cucumis sativus
Cucsa.179820 2.0kb upstream 2.0kb upstream 2000 false scaffold01233: 186830-188829 Cucumis sativus
Cucsa.179820 2.0kb downstream 2.0kb downstream 3891 true scaffold01233: 188830-192720 Cucumis sativus
Cucsa.179820 2.0kb downstream 2.0kb downstream 2000 false scaffold01233: 190721-192720 Cucumis sativus
Cucsa.179820 5.0kb upstream 5.0kb upstream 6891 true scaffold01233: 183830-190720 Cucumis sativus
Cucsa.179820 5.0kb upstream 5.0kb upstream 5000 false scaffold01233: 183830-188829 Cucumis sativus
Cucsa.179820 5.0kb downstream 5.0kb downstream 6891 true scaffold01233: 188830-195720 Cucumis sativus
Cucsa.179820 5.0kb downstream 5.0kb downstream 5000 false scaffold01233: 190721-195720 Cucumis sativus
Cucsa.179820 10.0kb upstream 10.0kb upstream 11891 true scaffold01233: 178830-190720 Cucumis sativus
Cucsa.179820 10.0kb upstream 10.0kb upstream 10000 false scaffold01233: 178830-188829 Cucumis sativus
Cucsa.179820 10.0kb downstream 10.0kb downstream 11891 true scaffold01233: 188830-200720 Cucumis sativus
Cucsa.179820 10.0kb downstream 10.0kb downstream 10000 false scaffold01233: 190721-200720 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301375 5265 Fabidae View MSA
124063437 5270 Rosid View MSA
123736551 5271 Pentapetalae View MSA
122791395 5272 Eudicot View MSA
122042523 5273 Angiosperm View MSA
121350947 5274 Embryophyte View MSA
123427183 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain