Gene : Cucsa.179870 C. sativus v1.0
Defline:  (1 of 1) PF12313 - NPR1/NIM1 like defence protein C terminal (NPR1_like_C) Genomic Order:  23
Name:  ? Cucsa.179870 Secondary Identifier:  ? PAC:16967237
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.179870 0.5kb upstream 0.5kb upstream 6050 true scaffold01233: 232127-238176 Cucumis sativus
Cucsa.179870 0.5kb upstream 0.5kb upstream 500 false scaffold01233: 237677-238176 Cucumis sativus
Cucsa.179870 0.5kb downstream 0.5kb downstream 6050 true scaffold01233: 231627-237676 Cucumis sativus
Cucsa.179870 0.5kb downstream 0.5kb downstream 500 false scaffold01233: 231627-232126 Cucumis sativus
Cucsa.179870 1.0kb upstream 1.0kb upstream 6550 true scaffold01233: 232127-238676 Cucumis sativus
Cucsa.179870 1.0kb upstream 1.0kb upstream 1000 false scaffold01233: 237677-238676 Cucumis sativus
Cucsa.179870 1.0kb downstream 1.0kb downstream 6550 true scaffold01233: 231127-237676 Cucumis sativus
Cucsa.179870 1.0kb downstream 1.0kb downstream 1000 false scaffold01233: 231127-232126 Cucumis sativus
Cucsa.179870 2.0kb upstream 2.0kb upstream 7550 true scaffold01233: 232127-239676 Cucumis sativus
Cucsa.179870 2.0kb upstream 2.0kb upstream 2000 false scaffold01233: 237677-239676 Cucumis sativus
Cucsa.179870 2.0kb downstream 2.0kb downstream 7550 true scaffold01233: 230127-237676 Cucumis sativus
Cucsa.179870 2.0kb downstream 2.0kb downstream 2000 false scaffold01233: 230127-232126 Cucumis sativus
Cucsa.179870 5.0kb upstream 5.0kb upstream 10550 true scaffold01233: 232127-242676 Cucumis sativus
Cucsa.179870 5.0kb upstream 5.0kb upstream 5000 false scaffold01233: 237677-242676 Cucumis sativus
Cucsa.179870 5.0kb downstream 5.0kb downstream 10550 true scaffold01233: 227127-237676 Cucumis sativus
Cucsa.179870 5.0kb downstream 5.0kb downstream 5000 false scaffold01233: 227127-232126 Cucumis sativus
Cucsa.179870 10.0kb upstream 10.0kb upstream 15550 true scaffold01233: 232127-247676 Cucumis sativus
Cucsa.179870 10.0kb upstream 10.0kb upstream 10000 false scaffold01233: 237677-247676 Cucumis sativus
Cucsa.179870 10.0kb downstream 10.0kb downstream 15550 true scaffold01233: 222127-237676 Cucumis sativus
Cucsa.179870 10.0kb downstream 10.0kb downstream 10000 false scaffold01233: 222127-232126 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303101 5265 Fabidae View MSA
124062135 5270 Rosid View MSA
123747921 5271 Pentapetalae View MSA
122786106 5272 Eudicot View MSA
122045658 5273 Angiosperm View MSA
121344043 5274 Embryophyte View MSA
123379964 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain