Gene : Cucsa.180160 C. sativus v1.0
Defline:  (1 of 1) 1.3.3.3 - Coproporphyrinogen oxidase / Coproporphyrinogenase Genomic Order:  52
Name:  ? Cucsa.180160 Secondary Identifier:  ? PAC:16967301
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus CHLOROPHYLL-SYN Cucumis sativus pathologic  
Csativus HEME-BIOSYNTHESIS-II Cucumis sativus pathologic  
Csativus PWY-5918 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.180160 0.5kb upstream 0.5kb upstream 4261 true scaffold01233: 482529-486789 Cucumis sativus
Cucsa.180160 0.5kb upstream 0.5kb upstream 500 false scaffold01233: 486290-486789 Cucumis sativus
Cucsa.180160 0.5kb downstream 0.5kb downstream 4261 true scaffold01233: 482029-486289 Cucumis sativus
Cucsa.180160 0.5kb downstream 0.5kb downstream 500 false scaffold01233: 482029-482528 Cucumis sativus
Cucsa.180160 1.0kb upstream 1.0kb upstream 4761 true scaffold01233: 482529-487289 Cucumis sativus
Cucsa.180160 1.0kb upstream 1.0kb upstream 1000 false scaffold01233: 486290-487289 Cucumis sativus
Cucsa.180160 1.0kb downstream 1.0kb downstream 4761 true scaffold01233: 481529-486289 Cucumis sativus
Cucsa.180160 1.0kb downstream 1.0kb downstream 1000 false scaffold01233: 481529-482528 Cucumis sativus
Cucsa.180160 2.0kb upstream 2.0kb upstream 5761 true scaffold01233: 482529-488289 Cucumis sativus
Cucsa.180160 2.0kb upstream 2.0kb upstream 2000 false scaffold01233: 486290-488289 Cucumis sativus
Cucsa.180160 2.0kb downstream 2.0kb downstream 5761 true scaffold01233: 480529-486289 Cucumis sativus
Cucsa.180160 2.0kb downstream 2.0kb downstream 2000 false scaffold01233: 480529-482528 Cucumis sativus
Cucsa.180160 5.0kb upstream 5.0kb upstream 8761 true scaffold01233: 482529-491289 Cucumis sativus
Cucsa.180160 5.0kb upstream 5.0kb upstream 5000 false scaffold01233: 486290-491289 Cucumis sativus
Cucsa.180160 5.0kb downstream 5.0kb downstream 8761 true scaffold01233: 477529-486289 Cucumis sativus
Cucsa.180160 5.0kb downstream 5.0kb downstream 5000 false scaffold01233: 477529-482528 Cucumis sativus
Cucsa.180160 10.0kb upstream 10.0kb upstream 13761 true scaffold01233: 482529-496289 Cucumis sativus
Cucsa.180160 10.0kb upstream 10.0kb upstream 10000 false scaffold01233: 486290-496289 Cucumis sativus
Cucsa.180160 10.0kb downstream 10.0kb downstream 13761 true scaffold01233: 472529-486289 Cucumis sativus
Cucsa.180160 10.0kb downstream 10.0kb downstream 10000 false scaffold01233: 472529-482528 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308564 5265 Fabidae View MSA
124062707 5270 Rosid View MSA
123737615 5271 Pentapetalae View MSA
122790941 5272 Eudicot View MSA
122043250 5273 Angiosperm View MSA
121345223 5274 Embryophyte View MSA
123424727 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain