Gene : Cucsa.180120 C. sativus v1.0
Defline:  (1 of 2) PTHR33179:SF7 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MKA23 Genomic Order:  48
Name:  ? Cucsa.180120 Secondary Identifier:  ? PAC:16967297
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.180120 0.5kb upstream 0.5kb upstream 1044 true scaffold01233: 458674-459717 Cucumis sativus
Cucsa.180120 0.5kb upstream 0.5kb upstream 500 false scaffold01233: 458674-459173 Cucumis sativus
Cucsa.180120 0.5kb downstream 0.5kb downstream 1044 true scaffold01233: 459174-460217 Cucumis sativus
Cucsa.180120 0.5kb downstream 0.5kb downstream 500 false scaffold01233: 459718-460217 Cucumis sativus
Cucsa.180120 1.0kb upstream 1.0kb upstream 1544 true scaffold01233: 458174-459717 Cucumis sativus
Cucsa.180120 1.0kb upstream 1.0kb upstream 1000 false scaffold01233: 458174-459173 Cucumis sativus
Cucsa.180120 1.0kb downstream 1.0kb downstream 1544 true scaffold01233: 459174-460717 Cucumis sativus
Cucsa.180120 1.0kb downstream 1.0kb downstream 1000 false scaffold01233: 459718-460717 Cucumis sativus
Cucsa.180120 2.0kb upstream 2.0kb upstream 2544 true scaffold01233: 457174-459717 Cucumis sativus
Cucsa.180120 2.0kb upstream 2.0kb upstream 2000 false scaffold01233: 457174-459173 Cucumis sativus
Cucsa.180120 2.0kb downstream 2.0kb downstream 2544 true scaffold01233: 459174-461717 Cucumis sativus
Cucsa.180120 2.0kb downstream 2.0kb downstream 2000 false scaffold01233: 459718-461717 Cucumis sativus
Cucsa.180120 5.0kb upstream 5.0kb upstream 5544 true scaffold01233: 454174-459717 Cucumis sativus
Cucsa.180120 5.0kb upstream 5.0kb upstream 5000 false scaffold01233: 454174-459173 Cucumis sativus
Cucsa.180120 5.0kb downstream 5.0kb downstream 5544 true scaffold01233: 459174-464717 Cucumis sativus
Cucsa.180120 5.0kb downstream 5.0kb downstream 5000 false scaffold01233: 459718-464717 Cucumis sativus
Cucsa.180120 10.0kb upstream 10.0kb upstream 10544 true scaffold01233: 449174-459717 Cucumis sativus
Cucsa.180120 10.0kb upstream 10.0kb upstream 10000 false scaffold01233: 449174-459173 Cucumis sativus
Cucsa.180120 10.0kb downstream 10.0kb downstream 10544 true scaffold01233: 459174-469717 Cucumis sativus
Cucsa.180120 10.0kb downstream 10.0kb downstream 10000 false scaffold01233: 459718-469717 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314098 5265 Fabidae View MSA
124071410 5270 Rosid View MSA
123750267 5271 Pentapetalae View MSA
122794981 5272 Eudicot View MSA
122048174 5273 Angiosperm View MSA
121350948 5274 Embryophyte View MSA
123381944 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain