Gene : Cucsa.180530 C. sativus v1.0
Defline:  (1 of 1) PTHR12640 - RIBOPHORIN II Genomic Order:  13
Name:  ? Cucsa.180530 Secondary Identifier:  ? PAC:16967321
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.180530 0.5kb upstream 0.5kb upstream 15120 true scaffold01236: 123958-139077 Cucumis sativus
Cucsa.180530 0.5kb upstream 0.5kb upstream 500 false scaffold01236: 123958-124457 Cucumis sativus
Cucsa.180530 0.5kb downstream 0.5kb downstream 15120 true scaffold01236: 124458-139577 Cucumis sativus
Cucsa.180530 0.5kb downstream 0.5kb downstream 500 false scaffold01236: 139078-139577 Cucumis sativus
Cucsa.180530 1.0kb upstream 1.0kb upstream 15620 true scaffold01236: 123458-139077 Cucumis sativus
Cucsa.180530 1.0kb upstream 1.0kb upstream 1000 false scaffold01236: 123458-124457 Cucumis sativus
Cucsa.180530 1.0kb downstream 1.0kb downstream 15620 true scaffold01236: 124458-140077 Cucumis sativus
Cucsa.180530 1.0kb downstream 1.0kb downstream 1000 false scaffold01236: 139078-140077 Cucumis sativus
Cucsa.180530 2.0kb upstream 2.0kb upstream 16620 true scaffold01236: 122458-139077 Cucumis sativus
Cucsa.180530 2.0kb upstream 2.0kb upstream 2000 false scaffold01236: 122458-124457 Cucumis sativus
Cucsa.180530 2.0kb downstream 2.0kb downstream 16620 true scaffold01236: 124458-141077 Cucumis sativus
Cucsa.180530 2.0kb downstream 2.0kb downstream 2000 false scaffold01236: 139078-141077 Cucumis sativus
Cucsa.180530 5.0kb upstream 5.0kb upstream 19620 true scaffold01236: 119458-139077 Cucumis sativus
Cucsa.180530 5.0kb upstream 5.0kb upstream 5000 false scaffold01236: 119458-124457 Cucumis sativus
Cucsa.180530 5.0kb downstream 5.0kb downstream 19620 true scaffold01236: 124458-144077 Cucumis sativus
Cucsa.180530 5.0kb downstream 5.0kb downstream 5000 false scaffold01236: 139078-144077 Cucumis sativus
Cucsa.180530 10.0kb upstream 10.0kb upstream 24620 true scaffold01236: 114458-139077 Cucumis sativus
Cucsa.180530 10.0kb upstream 10.0kb upstream 10000 false scaffold01236: 114458-124457 Cucumis sativus
Cucsa.180530 10.0kb downstream 10.0kb downstream 24620 true scaffold01236: 124458-149077 Cucumis sativus
Cucsa.180530 10.0kb downstream 10.0kb downstream 10000 false scaffold01236: 139078-149077 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041028 5273 Angiosperm View MSA
122310826 5265 Fabidae View MSA
124066748 5270 Rosid View MSA
123737285 5271 Pentapetalae View MSA
122787550 5272 Eudicot View MSA
121344151 5274 Embryophyte View MSA
123379986 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain