Gene : Cucsa.180460 C. sativus v1.0
Defline:  (1 of 185) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  6
Name:  ? Cucsa.180460 Secondary Identifier:  ? PAC:16967314
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.180460 0.5kb upstream 0.5kb upstream 2554 true scaffold01236: 56676-59229 Cucumis sativus
Cucsa.180460 0.5kb upstream 0.5kb upstream 500 false scaffold01236: 56676-57175 Cucumis sativus
Cucsa.180460 0.5kb downstream 0.5kb downstream 2554 true scaffold01236: 57176-59729 Cucumis sativus
Cucsa.180460 0.5kb downstream 0.5kb downstream 500 false scaffold01236: 59230-59729 Cucumis sativus
Cucsa.180460 1.0kb upstream 1.0kb upstream 3054 true scaffold01236: 56176-59229 Cucumis sativus
Cucsa.180460 1.0kb upstream 1.0kb upstream 1000 false scaffold01236: 56176-57175 Cucumis sativus
Cucsa.180460 1.0kb downstream 1.0kb downstream 3054 true scaffold01236: 57176-60229 Cucumis sativus
Cucsa.180460 1.0kb downstream 1.0kb downstream 1000 false scaffold01236: 59230-60229 Cucumis sativus
Cucsa.180460 2.0kb upstream 2.0kb upstream 4054 true scaffold01236: 55176-59229 Cucumis sativus
Cucsa.180460 2.0kb upstream 2.0kb upstream 2000 false scaffold01236: 55176-57175 Cucumis sativus
Cucsa.180460 2.0kb downstream 2.0kb downstream 4054 true scaffold01236: 57176-61229 Cucumis sativus
Cucsa.180460 2.0kb downstream 2.0kb downstream 2000 false scaffold01236: 59230-61229 Cucumis sativus
Cucsa.180460 5.0kb upstream 5.0kb upstream 7054 true scaffold01236: 52176-59229 Cucumis sativus
Cucsa.180460 5.0kb upstream 5.0kb upstream 5000 false scaffold01236: 52176-57175 Cucumis sativus
Cucsa.180460 5.0kb downstream 5.0kb downstream 7054 true scaffold01236: 57176-64229 Cucumis sativus
Cucsa.180460 5.0kb downstream 5.0kb downstream 5000 false scaffold01236: 59230-64229 Cucumis sativus
Cucsa.180460 10.0kb upstream 10.0kb upstream 12054 true scaffold01236: 47176-59229 Cucumis sativus
Cucsa.180460 10.0kb upstream 10.0kb upstream 10000 false scaffold01236: 47176-57175 Cucumis sativus
Cucsa.180460 10.0kb downstream 10.0kb downstream 12054 true scaffold01236: 57176-69229 Cucumis sativus
Cucsa.180460 10.0kb downstream 10.0kb downstream 10000 false scaffold01236: 59230-69229 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301275 5265 Fabidae View MSA
124060699 5270 Rosid View MSA
123741070 5271 Pentapetalae View MSA
122791611 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain