Gene : Cucsa.183420 C. sativus v1.0
Defline:  (1 of 4) 6.1.1.3 - Threonine--tRNA ligase / Threonyl-tRNA synthetase Genomic Order:  15
Name:  ? Cucsa.183420 Secondary Identifier:  ? PAC:16967521
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus TRNA-CHARGING-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.183420 0.5kb upstream 0.5kb upstream 4308 true scaffold01261: 342675-346982 Cucumis sativus
Cucsa.183420 0.5kb upstream 0.5kb upstream 500 false scaffold01261: 346483-346982 Cucumis sativus
Cucsa.183420 0.5kb downstream 0.5kb downstream 4308 true scaffold01261: 342175-346482 Cucumis sativus
Cucsa.183420 0.5kb downstream 0.5kb downstream 500 false scaffold01261: 342175-342674 Cucumis sativus
Cucsa.183420 1.0kb upstream 1.0kb upstream 4808 true scaffold01261: 342675-347482 Cucumis sativus
Cucsa.183420 1.0kb upstream 1.0kb upstream 1000 false scaffold01261: 346483-347482 Cucumis sativus
Cucsa.183420 1.0kb downstream 1.0kb downstream 4808 true scaffold01261: 341675-346482 Cucumis sativus
Cucsa.183420 1.0kb downstream 1.0kb downstream 1000 false scaffold01261: 341675-342674 Cucumis sativus
Cucsa.183420 2.0kb upstream 2.0kb upstream 5808 true scaffold01261: 342675-348482 Cucumis sativus
Cucsa.183420 2.0kb upstream 2.0kb upstream 2000 false scaffold01261: 346483-348482 Cucumis sativus
Cucsa.183420 2.0kb downstream 2.0kb downstream 5808 true scaffold01261: 340675-346482 Cucumis sativus
Cucsa.183420 2.0kb downstream 2.0kb downstream 2000 false scaffold01261: 340675-342674 Cucumis sativus
Cucsa.183420 5.0kb upstream 5.0kb upstream 8808 true scaffold01261: 342675-351482 Cucumis sativus
Cucsa.183420 5.0kb upstream 5.0kb upstream 5000 false scaffold01261: 346483-351482 Cucumis sativus
Cucsa.183420 5.0kb downstream 5.0kb downstream 8808 true scaffold01261: 337675-346482 Cucumis sativus
Cucsa.183420 5.0kb downstream 5.0kb downstream 5000 false scaffold01261: 337675-342674 Cucumis sativus
Cucsa.183420 10.0kb upstream 10.0kb upstream 13808 true scaffold01261: 342675-356482 Cucumis sativus
Cucsa.183420 10.0kb upstream 10.0kb upstream 10000 false scaffold01261: 346483-356482 Cucumis sativus
Cucsa.183420 10.0kb downstream 10.0kb downstream 13808 true scaffold01261: 332675-346482 Cucumis sativus
Cucsa.183420 10.0kb downstream 10.0kb downstream 10000 false scaffold01261: 332675-342674 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026743 5273 Angiosperm View MSA
122237221 5265 Fabidae View MSA
124051217 5270 Rosid View MSA
123745441 5271 Pentapetalae View MSA
122771506 5272 Eudicot View MSA
121296521 5274 Embryophyte View MSA
123334669 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain