Gene : Cucsa.188130 C. sativus v1.0
Defline:  (1 of 1) 1.14.13.122 - Chlorophyllide-a oxygenase / Cholorophyll-b synthase Genomic Order:  3
Name:  ? Cucsa.188130 Secondary Identifier:  ? PAC:16967813
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-5068 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.188130 0.5kb upstream 0.5kb upstream 4719 true scaffold01294: 29651-34369 Cucumis sativus
Cucsa.188130 0.5kb upstream 0.5kb upstream 500 false scaffold01294: 29651-30150 Cucumis sativus
Cucsa.188130 0.5kb downstream 0.5kb downstream 4719 true scaffold01294: 30151-34869 Cucumis sativus
Cucsa.188130 0.5kb downstream 0.5kb downstream 500 false scaffold01294: 34370-34869 Cucumis sativus
Cucsa.188130 1.0kb upstream 1.0kb upstream 5219 true scaffold01294: 29151-34369 Cucumis sativus
Cucsa.188130 1.0kb upstream 1.0kb upstream 1000 false scaffold01294: 29151-30150 Cucumis sativus
Cucsa.188130 1.0kb downstream 1.0kb downstream 5219 true scaffold01294: 30151-35369 Cucumis sativus
Cucsa.188130 1.0kb downstream 1.0kb downstream 1000 false scaffold01294: 34370-35369 Cucumis sativus
Cucsa.188130 2.0kb upstream 2.0kb upstream 6219 true scaffold01294: 28151-34369 Cucumis sativus
Cucsa.188130 2.0kb upstream 2.0kb upstream 2000 false scaffold01294: 28151-30150 Cucumis sativus
Cucsa.188130 2.0kb downstream 2.0kb downstream 6219 true scaffold01294: 30151-36369 Cucumis sativus
Cucsa.188130 2.0kb downstream 2.0kb downstream 2000 false scaffold01294: 34370-36369 Cucumis sativus
Cucsa.188130 5.0kb upstream 5.0kb upstream 9219 true scaffold01294: 25151-34369 Cucumis sativus
Cucsa.188130 5.0kb upstream 5.0kb upstream 5000 false scaffold01294: 25151-30150 Cucumis sativus
Cucsa.188130 5.0kb downstream 5.0kb downstream 9219 true scaffold01294: 30151-39369 Cucumis sativus
Cucsa.188130 5.0kb downstream 5.0kb downstream 5000 false scaffold01294: 34370-39369 Cucumis sativus
Cucsa.188130 10.0kb upstream 10.0kb upstream 14219 true scaffold01294: 20151-34369 Cucumis sativus
Cucsa.188130 10.0kb upstream 10.0kb upstream 10000 false scaffold01294: 20151-30150 Cucumis sativus
Cucsa.188130 10.0kb downstream 10.0kb downstream 14219 true scaffold01294: 30151-44369 Cucumis sativus
Cucsa.188130 10.0kb downstream 10.0kb downstream 10000 false scaffold01294: 34370-44369 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309423 5265 Fabidae View MSA
124067782 5270 Rosid View MSA
123744269 5271 Pentapetalae View MSA
122787506 5272 Eudicot View MSA
122048070 5273 Angiosperm View MSA
123429167 5275 Viridiplantae View MSA
121348979 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain