Gene : Cucsa.189560 C. sativus v1.0
Defline:  (1 of 2) PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER Genomic Order:  27
Name:  ? Cucsa.189560 Secondary Identifier:  ? PAC:16967889
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7511 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.189560 0.5kb upstream 0.5kb upstream 4892 true scaffold01305: 399223-404114 Cucumis sativus
Cucsa.189560 0.5kb upstream 0.5kb upstream 500 false scaffold01305: 403615-404114 Cucumis sativus
Cucsa.189560 0.5kb downstream 0.5kb downstream 4892 true scaffold01305: 398723-403614 Cucumis sativus
Cucsa.189560 0.5kb downstream 0.5kb downstream 500 false scaffold01305: 398723-399222 Cucumis sativus
Cucsa.189560 1.0kb upstream 1.0kb upstream 5392 true scaffold01305: 399223-404614 Cucumis sativus
Cucsa.189560 1.0kb upstream 1.0kb upstream 1000 false scaffold01305: 403615-404614 Cucumis sativus
Cucsa.189560 1.0kb downstream 1.0kb downstream 5392 true scaffold01305: 398223-403614 Cucumis sativus
Cucsa.189560 1.0kb downstream 1.0kb downstream 1000 false scaffold01305: 398223-399222 Cucumis sativus
Cucsa.189560 2.0kb upstream 2.0kb upstream 6392 true scaffold01305: 399223-405614 Cucumis sativus
Cucsa.189560 2.0kb upstream 2.0kb upstream 2000 false scaffold01305: 403615-405614 Cucumis sativus
Cucsa.189560 2.0kb downstream 2.0kb downstream 6392 true scaffold01305: 397223-403614 Cucumis sativus
Cucsa.189560 2.0kb downstream 2.0kb downstream 2000 false scaffold01305: 397223-399222 Cucumis sativus
Cucsa.189560 5.0kb upstream 5.0kb upstream 9392 true scaffold01305: 399223-408614 Cucumis sativus
Cucsa.189560 5.0kb upstream 5.0kb upstream 5000 false scaffold01305: 403615-408614 Cucumis sativus
Cucsa.189560 5.0kb downstream 5.0kb downstream 9392 true scaffold01305: 394223-403614 Cucumis sativus
Cucsa.189560 5.0kb downstream 5.0kb downstream 5000 false scaffold01305: 394223-399222 Cucumis sativus
Cucsa.189560 10.0kb upstream 10.0kb upstream 14392 true scaffold01305: 399223-413614 Cucumis sativus
Cucsa.189560 10.0kb upstream 10.0kb upstream 10000 false scaffold01305: 403615-413614 Cucumis sativus
Cucsa.189560 10.0kb downstream 10.0kb downstream 14392 true scaffold01305: 389223-403614 Cucumis sativus
Cucsa.189560 10.0kb downstream 10.0kb downstream 10000 false scaffold01305: 389223-399222 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313132 5265 Fabidae View MSA
124070525 5270 Rosid View MSA
123751414 5271 Pentapetalae View MSA
122787187 5272 Eudicot View MSA
122048569 5273 Angiosperm View MSA
121311024 5274 Embryophyte View MSA
123428817 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain