Gene : Cucsa.191670 C. sativus v1.0
Defline:  (1 of 1) PTHR30544//PTHR30544:SF3 - 23S RRNA METHYLTRANSFERASE Genomic Order:  7
Name:  ? Cucsa.191670 Secondary Identifier:  ? PAC:16967914
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.191670 0.5kb upstream 0.5kb upstream 10686 true scaffold01330: 49150-59835 Cucumis sativus
Cucsa.191670 0.5kb upstream 0.5kb upstream 500 false scaffold01330: 49150-49649 Cucumis sativus
Cucsa.191670 0.5kb downstream 0.5kb downstream 10686 true scaffold01330: 49650-60335 Cucumis sativus
Cucsa.191670 0.5kb downstream 0.5kb downstream 500 false scaffold01330: 59836-60335 Cucumis sativus
Cucsa.191670 1.0kb upstream 1.0kb upstream 11186 true scaffold01330: 48650-59835 Cucumis sativus
Cucsa.191670 1.0kb upstream 1.0kb upstream 1000 false scaffold01330: 48650-49649 Cucumis sativus
Cucsa.191670 1.0kb downstream 1.0kb downstream 11186 true scaffold01330: 49650-60835 Cucumis sativus
Cucsa.191670 1.0kb downstream 1.0kb downstream 1000 false scaffold01330: 59836-60835 Cucumis sativus
Cucsa.191670 2.0kb upstream 2.0kb upstream 12186 true scaffold01330: 47650-59835 Cucumis sativus
Cucsa.191670 2.0kb upstream 2.0kb upstream 2000 false scaffold01330: 47650-49649 Cucumis sativus
Cucsa.191670 2.0kb downstream 2.0kb downstream 12186 true scaffold01330: 49650-61835 Cucumis sativus
Cucsa.191670 2.0kb downstream 2.0kb downstream 2000 false scaffold01330: 59836-61835 Cucumis sativus
Cucsa.191670 5.0kb upstream 5.0kb upstream 15186 true scaffold01330: 44650-59835 Cucumis sativus
Cucsa.191670 5.0kb upstream 5.0kb upstream 5000 false scaffold01330: 44650-49649 Cucumis sativus
Cucsa.191670 5.0kb downstream 5.0kb downstream 15186 true scaffold01330: 49650-64835 Cucumis sativus
Cucsa.191670 5.0kb downstream 5.0kb downstream 5000 false scaffold01330: 59836-64835 Cucumis sativus
Cucsa.191670 10.0kb upstream 10.0kb upstream 20186 true scaffold01330: 39650-59835 Cucumis sativus
Cucsa.191670 10.0kb upstream 10.0kb upstream 10000 false scaffold01330: 39650-49649 Cucumis sativus
Cucsa.191670 10.0kb downstream 10.0kb downstream 16963 true scaffold01330: 49650-66612 Cucumis sativus
Cucsa.191670 10.0kb downstream 10.0kb downstream 6777 false scaffold01330: 59836-66612 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305533 5265 Fabidae View MSA
124065414 5270 Rosid View MSA
123740690 5271 Pentapetalae View MSA
122787851 5272 Eudicot View MSA
122043195 5273 Angiosperm View MSA
123429187 5275 Viridiplantae View MSA
121346291 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain