Gene : Cucsa.192990 C. sativus v1.0
Defline:  (1 of 1) PTHR13696:SF1 - SEPTUM SITE-DETERMINING PROTEIN MIND HOMOLOG, CHLOROPLASTIC-RELATED Genomic Order:  6
Name:  ? Cucsa.192990 Secondary Identifier:  ? PAC:16968031
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.192990 0.5kb upstream 0.5kb upstream 1419 true scaffold01335: 28052-29470 Cucumis sativus
Cucsa.192990 0.5kb upstream 0.5kb upstream 500 false scaffold01335: 28971-29470 Cucumis sativus
Cucsa.192990 0.5kb downstream 0.5kb downstream 1419 true scaffold01335: 27552-28970 Cucumis sativus
Cucsa.192990 0.5kb downstream 0.5kb downstream 500 false scaffold01335: 27552-28051 Cucumis sativus
Cucsa.192990 1.0kb upstream 1.0kb upstream 1919 true scaffold01335: 28052-29970 Cucumis sativus
Cucsa.192990 1.0kb upstream 1.0kb upstream 1000 false scaffold01335: 28971-29970 Cucumis sativus
Cucsa.192990 1.0kb downstream 1.0kb downstream 1919 true scaffold01335: 27052-28970 Cucumis sativus
Cucsa.192990 1.0kb downstream 1.0kb downstream 1000 false scaffold01335: 27052-28051 Cucumis sativus
Cucsa.192990 2.0kb upstream 2.0kb upstream 2919 true scaffold01335: 28052-30970 Cucumis sativus
Cucsa.192990 2.0kb upstream 2.0kb upstream 2000 false scaffold01335: 28971-30970 Cucumis sativus
Cucsa.192990 2.0kb downstream 2.0kb downstream 2919 true scaffold01335: 26052-28970 Cucumis sativus
Cucsa.192990 2.0kb downstream 2.0kb downstream 2000 false scaffold01335: 26052-28051 Cucumis sativus
Cucsa.192990 5.0kb upstream 5.0kb upstream 5919 true scaffold01335: 28052-33970 Cucumis sativus
Cucsa.192990 5.0kb upstream 5.0kb upstream 5000 false scaffold01335: 28971-33970 Cucumis sativus
Cucsa.192990 5.0kb downstream 5.0kb downstream 5919 true scaffold01335: 23052-28970 Cucumis sativus
Cucsa.192990 5.0kb downstream 5.0kb downstream 5000 false scaffold01335: 23052-28051 Cucumis sativus
Cucsa.192990 10.0kb upstream 10.0kb upstream 10919 true scaffold01335: 28052-38970 Cucumis sativus
Cucsa.192990 10.0kb upstream 10.0kb upstream 10000 false scaffold01335: 28971-38970 Cucumis sativus
Cucsa.192990 10.0kb downstream 10.0kb downstream 10919 true scaffold01335: 18052-28970 Cucumis sativus
Cucsa.192990 10.0kb downstream 10.0kb downstream 10000 false scaffold01335: 18052-28051 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309065 5265 Fabidae View MSA
124063209 5270 Rosid View MSA
123737369 5271 Pentapetalae View MSA
122788241 5272 Eudicot View MSA
122045379 5273 Angiosperm View MSA
121344611 5274 Embryophyte View MSA
123425268 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain