Gene : Cucsa.194040 C. sativus v1.0
Defline:  (1 of 1) PTHR11680//PTHR11680:SF11 - SERINE HYDROXYMETHYLTRANSFERASE Genomic Order:  19
Name:  ? Cucsa.194040 Secondary Identifier:  ? PAC:16968130
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus GLYSYN-PWY Cucumis sativus pathologic  
Csativus PWY-2161 Cucumis sativus pathologic  
Csativus PWY-3841 Cucumis sativus pathologic  
Csativus SER-GLYSYN-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.194040 0.5kb upstream 0.5kb upstream 3279 true scaffold01337: 210056-213334 Cucumis sativus
Cucsa.194040 0.5kb upstream 0.5kb upstream 500 false scaffold01337: 210056-210555 Cucumis sativus
Cucsa.194040 0.5kb downstream 0.5kb downstream 3279 true scaffold01337: 210556-213834 Cucumis sativus
Cucsa.194040 0.5kb downstream 0.5kb downstream 500 false scaffold01337: 213335-213834 Cucumis sativus
Cucsa.194040 1.0kb upstream 1.0kb upstream 3779 true scaffold01337: 209556-213334 Cucumis sativus
Cucsa.194040 1.0kb upstream 1.0kb upstream 1000 false scaffold01337: 209556-210555 Cucumis sativus
Cucsa.194040 1.0kb downstream 1.0kb downstream 3779 true scaffold01337: 210556-214334 Cucumis sativus
Cucsa.194040 1.0kb downstream 1.0kb downstream 1000 false scaffold01337: 213335-214334 Cucumis sativus
Cucsa.194040 2.0kb upstream 2.0kb upstream 4779 true scaffold01337: 208556-213334 Cucumis sativus
Cucsa.194040 2.0kb upstream 2.0kb upstream 2000 false scaffold01337: 208556-210555 Cucumis sativus
Cucsa.194040 2.0kb downstream 2.0kb downstream 4779 true scaffold01337: 210556-215334 Cucumis sativus
Cucsa.194040 2.0kb downstream 2.0kb downstream 2000 false scaffold01337: 213335-215334 Cucumis sativus
Cucsa.194040 5.0kb upstream 5.0kb upstream 7779 true scaffold01337: 205556-213334 Cucumis sativus
Cucsa.194040 5.0kb upstream 5.0kb upstream 5000 false scaffold01337: 205556-210555 Cucumis sativus
Cucsa.194040 5.0kb downstream 5.0kb downstream 7779 true scaffold01337: 210556-218334 Cucumis sativus
Cucsa.194040 5.0kb downstream 5.0kb downstream 5000 false scaffold01337: 213335-218334 Cucumis sativus
Cucsa.194040 10.0kb upstream 10.0kb upstream 12779 true scaffold01337: 200556-213334 Cucumis sativus
Cucsa.194040 10.0kb upstream 10.0kb upstream 10000 false scaffold01337: 200556-210555 Cucumis sativus
Cucsa.194040 10.0kb downstream 10.0kb downstream 12779 true scaffold01337: 210556-223334 Cucumis sativus
Cucsa.194040 10.0kb downstream 10.0kb downstream 10000 false scaffold01337: 213335-223334 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313594 5265 Fabidae View MSA
124067933 5270 Rosid View MSA
123746459 5271 Pentapetalae View MSA
122786293 5272 Eudicot View MSA
122042145 5273 Angiosperm View MSA
121347378 5274 Embryophyte View MSA
123426459 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain